C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: programmed cell death 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000090470 PDCD7 9606 - 15:65117379-65133836 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000204549 PDCD7-001 65117379-65133836 protein_coding
  ENST00000559051 PDCD7-004 65118964-65119774 retained_intron
  ENST00000560313 PDCD7-005 65118759-65129170 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000204549ENST00000560313
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000204549 5.922±0.00 6.552±0.00 1.654±0.00 3.564±1.28 4.561±2.33 4.297±2.79 2.092±1.50 3.840±2.63 2.548±0.27 3.860±2.04 1.811±1.35 9.347±4.43 7.592±1.94 18.234±4.18
ENST00000560313 N/A N/A N/A 6.620±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RY CIL_0007RY_0001 VISTA 15:64785331-65389080
CIL_0006TY CIL_0006TY_0002 CGP 15:65117379-65185342

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005689 IDA U12-type spliceosomal complex
GO:0006915 IEA apoptotic process
GO:0008380 IC RNA splicing
GO:0051384 ISS response to glucocorticoid
GO:0070234 IEA positive regulation of T cell apoptotic process
GO:2001235 IEA positive regulation of apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038976 pdcd7 programmed cell death 7 protein_coding Danio_rerio
ENSMUSG00000041837 Pdcd7 programmed cell death 7 protein_coding Mus_musculus

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