C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: programmed cell death 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000204549 PDCD7-001 ENSG00000090470 9606 - 15:65117379-65133836 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000204549
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000204549 5.922±0.00 6.552±0.00 1.654±0.00 3.564±1.28 4.561±2.33 4.297±2.79 2.092±1.50 3.840±2.63 2.548±0.27 3.860±2.04 1.811±1.35 9.347±4.43 7.592±1.94 18.234±4.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RY CIL_0007RY_0001 VISTA 15:64785331-65389080
CIL_0006TY CIL_0006TY_0002 CGP 15:65117379-65185342

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005689 IDA U12-type spliceosomal complex
GO:0006915 IEA apoptotic process
GO:0008380 IC RNA splicing
GO:0051384 ISS response to glucocorticoid
GO:0070234 IEA positive regulation of T cell apoptotic process
GO:2001235 IEA positive regulation of apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048184 Pdcd7-201 protein_coding Mus_musculus 0 1679
ENSMUST00000146544 Golga2-011 processed_transcript Mus_musculus 0.00005 55

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