C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006TY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000038976-ENSDARG00000029063 CGP 7955 7:14519590-14563525
GeneTranscriptPositionBiotype
ENSDARG00000029063 (clpxa)
ClpX caseinolytic peptidase X homolog a 		ENSDART00000032899 (clpxa-201) 14542830-14563525 protein_coding
ENSDARG00000038976 (pdcd7)
programmed cell death 7 		ENSDART00000056893 (pdcd7-201) 14519590-14535767 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0006TY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000090470-ENSG00000166855 CGP 9606 15:65117379-65185342
GeneTranscriptPositionBiotype
ENSG00000090470 (PDCD7)
programmed cell death 7 		ENST00000204549 (PDCD7-001) 65117379-65133836 protein_coding
ENST00000559051 (PDCD7-004) 65118964-65119774 retained_intron
ENST00000560313 (PDCD7-005) 65118759-65129170 protein_coding
ENSG00000166855 (CLPX)
caseinolytic mitochondrial matrix peptidase chaperone subunit 		ENST00000300107 (CLPX-001) 65148219-65185342 protein_coding
ENST00000558103 (CLPX-006) 65158191-65162647 retained_intron
ENST00000558958 (CLPX-002) 65156686-65185342 retained_intron
ENST00000559152 (CLPX-003) 65150514-65185216 nonsense_mediated_decay
ENST00000559218 (CLPX-005) 65166651-65184484 protein_coding
ENST00000560166 (CLPX-007) 65154679-65155851 retained_intron

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006TY_0001ENSDARG00000029063ENSDART00000032899ENSDARG00000038976ENSDART00000056893CIL_0006TY_0002ENSG00000090470ENST00000204549ENST00000559051ENST00000560313ENSG00000166855ENST00000300107ENST00000558103ENST00000558958ENST00000559152ENST00000559218ENST00000560166
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006TY_0001ENSDARG00000029063ENSDART00000032899ENSDARG00000038976ENSDART00000056893CIL_0006TY_0002ENSG00000090470ENST00000204549ENST00000560313ENSG00000166855ENST00000300107ENST00000558958ENST00000559152ENST00000560166
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000029063 ENSDART00000032899 N/A N/A N/A 12.154±4.10 N/A N/A 21.756±16.66 6.048±0.00 54.684±0.00 N/A 30.517±0.00 N/A N/A N/A
ENSDARG00000038976 ENSDART00000056893 N/A N/A N/A 3.356±1.51 N/A N/A 4.016±0.73 14.000±0.00 1.879±0.00 N/A 1.917±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000090470 ENST00000204549 5.922±0.00 6.552±0.00 1.654±0.00 3.564±1.28 4.561±2.33 4.297±2.79 2.092±1.50 3.840±2.63 2.548±0.27 3.860±2.04 1.811±1.35 9.347±4.43 7.592±1.94 18.234±4.18
ENST00000559051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560313 N/A N/A N/A 6.620±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166855 ENST00000300107 3.607±0.00 4.565±0.00 0.907±0.00 4.450±0.99 4.785±0.00 2.893±0.88 4.676±1.50 5.599±0.70 5.580±3.10 1.925±0.48 5.018±3.18 6.081±1.44 4.212±0.83 5.271±0.02
ENST00000558103 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558958 N/A N/A N/A N/A N/A 2.856±0.00 N/A 4.081±0.00 N/A N/A N/A 5.815±2.31 N/A N/A
ENST00000559152 3.754±0.00 6.918±0.00 1.301±0.00 6.046±0.00 3.698±1.64 2.168±0.00 6.654±0.00 4.055±0.28 3.764±2.69 4.438±0.92 3.981±2.70 8.280±7.03 4.597±3.80 18.052±4.55
ENST00000559218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560166 N/A N/A N/A N/A 6.309±0.00 18.254±0.00 5.938±0.00 15.223±0.00 13.777±0.00 7.486±0.00 6.398±0.00 17.089±0.00 N/A N/A

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