C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: golgin A3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000090615 GOLGA3 9606 - 12:132768909-132828858 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000204726 GOLGA3-201 132768909-132828702 protein_coding
  ENST00000450791 GOLGA3-001 132768915-132822311 protein_coding
  ENST00000456883 GOLGA3-003 132774498-132828853 protein_coding
  ENST00000534967 GOLGA3-005 132827824-132828731 processed_transcript
  ENST00000537317 GOLGA3-006 132822272-132828858 processed_transcript
  ENST00000537452 GOLGA3-008 132783868-132822312 retained_intron
  ENST00000541013 GOLGA3-007 132773260-132776692 nonsense_mediated_decay
  ENST00000545875 GOLGA3-202 132783868-132828840 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000204726ENST00000450791ENST00000537452
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000204726 N/A N/A N/A N/A N/A N/A 1.071±0.00 N/A N/A 2.350±0.00 N/A 7.255±0.00 N/A N/A
ENST00000450791 19.367±0.00 20.798±0.00 2.118±0.00 5.674±2.34 13.805±6.57 7.543±2.83 1.870±1.34 11.242±0.00 6.639±0.00 0.890±0.00 4.229±0.00 10.425±4.82 4.493±2.17 10.877±4.93
ENST00000537452 N/A N/A N/A N/A N/A N/A N/A 1.943±0.00 N/A 2.041±0.00 1.136±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00006K CIL_00006K_0002 CGP 12:132725503-132828858

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005215 NAS transporter activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005793 IEA endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 IDA Golgi apparatus
GO:0005829 IDA cytosol
GO:0006891 NAS intra-Golgi vesicle-mediated transport
GO:0016020 IDA membrane
GO:0017119 IDA Golgi transport complex
GO:0090498 IDA extrinsic component of Golgi membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062511 golga3 golgi autoantigen, golgin subfamily a, 3 protein_coding Danio_rerio
ENSMUSG00000029502 Golga3 golgi autoantigen, golgin subfamily a, 3 protein_coding Mus_musculus

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