C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00006K_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000035607-ENSDARG00000062511 CGP 7955 5:20726792-20790039
GeneTranscriptPositionBiotype
ENSDARG00000035607 (ankle2)
ankyrin repeat and LEM domain containing 2 		ENSDART00000090521 (ankle2-201) 20727223-20745466 protein_coding
ENSDART00000142531 (ankle2-002) 20736958-20745443 protein_coding
ENSDART00000145210 (ankle2-001) 20726792-20746543 protein_coding
ENSDARG00000062511 (golga3)
golgi autoantigen, golgin subfamily a, 3 		ENSDART00000090494 (golga3-201) 20750402-20787659 protein_coding
ENSDART00000137022 (golga3-001) 20749243-20790039 protein_coding
CIL_00006K_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000176915-ENSG00000090615 CGP 9606 12:132725503-132828858
GeneTranscriptPositionBiotype
ENSG00000090615 (GOLGA3)
golgin A3 		ENST00000204726 (GOLGA3-201) 132768909-132828702 protein_coding
ENST00000450791 (GOLGA3-001) 132768915-132822311 protein_coding
ENST00000456883 (GOLGA3-003) 132774498-132828853 protein_coding
ENST00000534967 (GOLGA3-005) 132827824-132828731 processed_transcript
ENST00000537317 (GOLGA3-006) 132822272-132828858 processed_transcript
ENST00000537452 (GOLGA3-008) 132783868-132822312 retained_intron
ENST00000541013 (GOLGA3-007) 132773260-132776692 nonsense_mediated_decay
ENST00000545875 (GOLGA3-202) 132783868-132828840 protein_coding
ENSG00000176915 (ANKLE2)
ankyrin repeat and LEM domain containing 2 		ENST00000357997 (ANKLE2-001) 132725503-132761888 protein_coding
ENST00000439231 (ANKLE2-010) 132730233-132742558 retained_intron
ENST00000505031 (ANKLE2-011) 132729723-132738907 retained_intron
ENST00000535036 (ANKLE2-006) 132735407-132748020 nonsense_mediated_decay
ENST00000538591 (ANKLE2-009) 132734968-132743254 retained_intron
ENST00000538766 (ANKLE2-008) 132727350-132735123 protein_coding
ENST00000539605 (ANKLE2-002) 132725668-132761813 retained_intron
ENST00000542282 (ANKLE2-014) 132726806-132732210 protein_coding
ENST00000542374 (ANKLE2-012) 132727286-132735439 processed_transcript
ENST00000542657 (ANKLE2-003) 132727133-132732100 protein_coding
ENST00000545623 (ANKLE2-004) 132737043-132751334 retained_intron
ENST00000546061 (ANKLE2-005) 132743239-132749027 processed_transcript
ENSG00000232888 (RPS11P5)
ribosomal protein S11 pseudogene 5 		ENST00000488441 (RPS11P5-001) 132825701-132826184 processed_pseudogene
ENSG00000256108 (RP13-672B3.5)
 ENST00000539323 (RP13-672B3.5-001) 132745156-132745729 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00006K_0001ENSDARG00000035607ENSDART00000090521ENSDART00000142531ENSDART00000145210ENSDARG00000062511ENSDART00000090494ENSDART00000137022CIL_00006K_0002ENSG00000090615ENST00000204726ENST00000450791ENST00000456883ENST00000534967ENST00000537317ENST00000537452ENST00000541013ENST00000545875ENSG00000176915ENST00000357997ENST00000439231ENST00000505031ENST00000535036ENST00000538591ENST00000538766ENST00000539605ENST00000542282ENST00000542374ENST00000542657ENST00000545623ENST00000546061ENSG00000232888ENST00000488441ENSG00000256108ENST00000539323
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00006K_0001ENSDARG00000035607ENSDART00000090521ENSDART00000145210ENSDARG00000062511ENSDART00000090494ENSDART00000137022CIL_00006K_0002ENSG00000090615ENST00000204726ENST00000450791ENST00000537452ENSG00000176915ENST00000357997ENST00000505031ENST00000538591ENST00000538766ENST00000539605ENST00000542657ENST00000545623ENSG00000232888ENST00000488441ENSG00000256108ENST00000539323
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000035607 ENSDART00000090521 N/A N/A N/A 0.405±0.00 N/A N/A 0.542±0.34 1.439±0.72 0.291±0.00 N/A 0.153±0.00 N/A N/A N/A
ENSDART00000142531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000145210 N/A N/A N/A 0.222±0.12 N/A N/A 0.644±0.26 0.715±0.17 0.344±0.00 N/A N/A N/A N/A N/A
ENSDARG00000062511 ENSDART00000090494 N/A N/A N/A 1.408±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000137022 N/A N/A N/A 4.121±2.25 N/A N/A 1.519±1.31 1.888±0.88 N/A N/A 0.626±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000090615 ENST00000204726 N/A N/A N/A N/A N/A N/A 1.071±0.00 N/A N/A 2.350±0.00 N/A 7.255±0.00 N/A N/A
ENST00000450791 19.367±0.00 20.798±0.00 2.118±0.00 5.674±2.34 13.805±6.57 7.543±2.83 1.870±1.34 11.242±0.00 6.639±0.00 0.890±0.00 4.229±0.00 10.425±4.82 4.493±2.17 10.877±4.93
ENST00000456883 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537452 N/A N/A N/A N/A N/A N/A N/A 1.943±0.00 N/A 2.041±0.00 1.136±0.00 N/A N/A N/A
ENST00000541013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545875 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000176915 ENST00000357997 11.427±0.00 9.431±0.00 2.096±0.00 4.712±2.46 8.508±4.22 6.404±1.30 4.428±2.92 7.808±4.41 3.582±0.68 9.821±4.91 8.266±6.46 15.397±7.34 9.595±0.46 36.385±3.42
ENST00000439231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505031 N/A N/A 0.808±0.00 N/A 1.802±0.00 2.531±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 94.524±0.00
ENST00000538766 N/A N/A N/A N/A 4.846±0.00 N/A 1.645±0.00 N/A 4.054±0.00 N/A N/A N/A N/A 65.017±0.00
ENST00000539605 N/A 1.746±0.00 N/A N/A N/A N/A N/A N/A N/A 0.886±0.00 N/A N/A N/A N/A
ENST00000542282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.108±0.00 N/A N/A N/A
ENST00000545623 N/A N/A 2.838±0.00 N/A N/A N/A 2.715±0.00 N/A N/A N/A N/A N/A N/A 63.220±0.00
ENST00000546061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000232888 ENST00000488441 0.436±0.00 0.915±0.00 0.246±0.00 0.228±0.04 1.117±0.29 0.744±0.31 0.218±0.00 0.307±0.00 0.765±0.68 0.556±0.14 0.741±0.00 0.901±0.26 0.216±0.00 0.315±0.08
ENSG00000256108 ENST00000539323 0.033±0.00 0.181±0.00 N/A 0.040±0.00 0.078±0.00 N/A N/A 0.874±0.00 N/A N/A N/A 0.095±0.00 N/A 0.089±0.04

Loading