C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: golgin A3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000450791 GOLGA3-001 ENSG00000090615 9606 - 12:132768915-132822311 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000450791
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000450791 19.367±0.00 20.798±0.00 2.118±0.00 5.674±2.34 13.805±6.57 7.543±2.83 1.870±1.34 11.242±0.00 6.639±0.00 0.890±0.00 4.229±0.00 10.425±4.82 4.493±2.17 10.877±4.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00006K CIL_00006K_0002 CGP 12:132725503-132828858

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005215 NAS transporter activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005794 IDA Golgi apparatus
GO:0005829 IDA cytosol
GO:0006891 NAS intra-Golgi vesicle-mediated transport
GO:0016020 IDA membrane
GO:0017119 IDA Golgi transport complex
GO:0090498 IDA extrinsic component of Golgi membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031477 Golga3-002 protein_coding Mus_musculus 0 3347
ENSMUST00000136900 Golga3-003 retained_intron Mus_musculus 0 351
ENSMUST00000139611 Golga3-005 protein_coding Mus_musculus 0 224

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