C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphatidylinositol transfer protein, membrane-associated 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000090975 PITPNM2 9606 - 12:122983480-123150015 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000280562 PITPNM2-001 122983480-123110495 protein_coding
  ENST00000320201 PITPNM2-201 122983480-123110428 protein_coding
  ENST00000436074 PITPNM2-009 122997438-123006120 retained_intron
  ENST00000451868 PITPNM2-002 123000304-123105499 processed_transcript
  ENST00000535289 PITPNM2-008 123034252-123110489 retained_intron
  ENST00000541244 PITPNM2-006 123034545-123076095 protein_coding
  ENST00000542210 PITPNM2-007 123013996-123150015 protein_coding
  ENST00000542749 PITPNM2-005 122983481-123034654 protein_coding
  ENST00000546049 PITPNM2-003 123000303-123081333 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000280562ENST00000320201ENST00000451868ENST00000542749
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000280562 1.774±0.00 0.466±0.00 0.467±0.00 0.801±0.00 0.684±0.00 N/A 0.623±0.00 1.936±0.00 0.542±0.00 N/A N/A 2.039±1.49 0.720±0.14 2.444±0.91
ENST00000320201 N/A N/A N/A 0.971±0.00 N/A 1.104±0.00 N/A N/A N/A N/A N/A N/A 1.184±0.00 N/A
ENST00000451868 N/A N/A N/A N/A 1.066±0.00 0.763±0.00 1.450±0.00 N/A N/A 1.649±0.00 N/A N/A N/A N/A
ENST00000542749 3.400±0.00 3.122±0.00 N/A 1.278±0.55 0.713±0.43 1.844±0.00 1.621±1.25 2.974±2.23 1.261±0.00 5.493±0.00 0.058±0.00 2.819±1.32 0.729±0.07 2.130±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084E CIL_00084E_0001 VISTA 12:122762377-123367178
CIL_0002P7 CIL_0002P7_0001 CGP 12:122980060-123150015
CIL_0003J5 CIL_0003J5_0001 CGP 12:122983480-123244014

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 NAS calcium ion binding
GO:0005622 IEA intracellular
GO:0006810 IEA transport
GO:0008152 NAS metabolic process
GO:0008289 IEA lipid binding
GO:0016021 NAS integral component of membrane
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089101 plrdgb PITP-less RdgB-like protein protein_coding Danio_rerio
ENSMUSG00000029406 Pitpnm2 phosphatidylinositol transfer protein, membrane-associated 2 protein_coding Mus_musculus

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