C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol transfer protein, membrane-associated 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000542749 PITPNM2-005 ENSG00000090975 9606 - 12:122983481-123034654 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000542749
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000542749 3.400±0.00 3.122±0.00 1.278±0.55 0.713±0.43 1.844±0.00 1.621±1.25 2.974±2.23 1.261±0.00 5.493±0.00 0.058±0.00 2.819±1.32 0.729±0.07 2.130±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084E CIL_00084E_0001 VISTA 12:122762377-123367178
CIL_0002P7 CIL_0002P7_0001 CGP 12:122980060-123150015
CIL_0003J5 CIL_0003J5_0001 CGP 12:122983480-123244014

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 NAS calcium ion binding
GO:0005622 IEA intracellular
GO:0006810 IEA transport
GO:0008152 NAS metabolic process
GO:0008289 IEA lipid binding
GO:0016021 NAS integral component of membrane
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161938 Pitpnm2-003 protein_coding Mus_musculus 0 2713
ENSMUST00000086123 Pitpnm2-201 protein_coding Mus_musculus 0 1962
ENSMUST00000162812 Pitpnm2-001 protein_coding Mus_musculus 0 1962
ENSMUST00000161273 Pitpnm2-005 protein_coding Mus_musculus 0 1962
ENSMUST00000159628 Pitpnm2-008 retained_intron Mus_musculus 0 1786
ENSMUST00000159677 Pitpnm2-002 processed_transcript Mus_musculus 0 1212
ENSMUST00000161479 Pitpnm2-010 retained_intron Mus_musculus 0 802
ENSMUST00000161530 Pitpnm2-006 retained_intron Mus_musculus 0 431
ENSDART00000060194 PITPNM2-201 protein_coding Danio_rerio 0 399
ENSMUST00000161644 Pitpnm2-009 protein_coding Mus_musculus 5.00264e-43 182

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