C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 26 (anion exchanger), member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000091138 SLC26A3 9606 - 7:107765467-107803225 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000340010 SLC26A3-002 107765472-107803207 protein_coding
  ENST00000379083 SLC26A3-001 107765467-107803225 nonsense_mediated_decay
  ENST00000453332 SLC26A3-003 107791852-107803225 protein_coding
  ENST00000468551 SLC26A3-005 107782830-107787522 retained_intron
  ENST00000469651 SLC26A3-006 107776015-107776752 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000340010ENST00000379083ENST00000453332ENST00000468551ENST00000469651
Transcript ID Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000340010 0.034±0.00 83.806±83.27 0.008±0.00 N/A 0.206±0.00 N/A 0.010±0.00 0.022±0.00 0.471±0.34
ENST00000379083 N/A N/A N/A N/A N/A 0.041±0.00 0.011±0.00 N/A N/A
ENST00000453332 N/A N/A N/A N/A N/A N/A 0.052±0.00 N/A N/A
ENST00000468551 N/A N/A N/A 0.076±0.00 N/A N/A N/A N/A N/A
ENST00000469651 0.084±0.00 N/A N/A 0.089±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ZV CIL_0008ZV_0001 VISTA 7:107646717-108248447

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0003712 TAS transcription cofactor activity
GO:0005215 TAS transporter activity
GO:0005515 IPI protein binding
GO:0005886 TAS plasma membrane
GO:0006355 TAS regulation of transcription, DNA-templated
GO:0006811 TAS ion transport
GO:0006820 TAS anion transport
GO:0006821 IEA chloride transport
GO:0007588 TAS excretion
GO:0008271 IEA secondary active sulfate transmembrane transporter activity
GO:0008272 IEA sulfate transport
GO:0015106 ISS bicarbonate transmembrane transporter activity
GO:0015108 ISS chloride transmembrane transporter activity
GO:0015116 IEA sulfate transmembrane transporter activity
GO:0015301 IEA anion:anion antiporter activity
GO:0015701 IEA bicarbonate transport
GO:0016020 ISS:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016324 IEA apical plasma membrane
GO:0031526 IEA brush border membrane
GO:0048240 ISS sperm capacitation
GO:0051454 ISS intracellular pH elevation
GO:0055085 TAS:IEA transmembrane transport
GO:0060081 ISS membrane hyperpolarization
GO:0071320 ISS cellular response to cAMP
GO:0097225 ISS sperm midpiece
GO:1902358 IEA sulfate transmembrane transport
GO:1902476 IEA chloride transmembrane transport
GO:2001141 TAS regulation of RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003615 SLC26A3 (1 of 2) solute carrier family 26 (anion exchanger), member 3 protein_coding Danio_rerio
ENSDARG00000007371 slc26a3 solute carrier family 26, member 3 protein_coding Danio_rerio
ENSMUSG00000001225 Slc26a3 solute carrier family 26, member 3 protein_coding Mus_musculus

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