C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 80
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000091986 CCDC80 9606 - 3:112604560-112649530 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000206423 CCDC80-001 112604560-112641269 protein_coding
  ENST00000439685 CCDC80-003 112605101-112641300 protein_coding
  ENST00000461431 CCDC80-007 112605600-112638097 protein_coding
  ENST00000469554 CCDC80-011 112640432-112641143 processed_transcript
  ENST00000473959 CCDC80-010 112640721-112649447 processed_transcript
  ENST00000475181 CCDC80-012 112639400-112641056 processed_transcript
  ENST00000479368 CCDC80-006 112605467-112610280 protein_coding
  ENST00000480275 CCDC80-009 112640766-112649530 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000206423ENST00000439685ENST00000461431ENST00000469554ENST00000479368
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000206423 2.301±0.00 3.471±0.00 1.041±0.00 0.874±0.00 17.315±8.38 10.557±0.00 4.136±0.89 0.976±0.52 43.974±0.00 6.786±2.59 0.989±0.00 19.790±15.94 1.739±0.00 7.809±0.00
ENST00000439685 9.391±0.00 19.032±0.00 N/A 1.359±0.00 117.090±0.00 6.109±0.00 14.077±0.00 N/A 0.491±0.00 N/A N/A 47.501±38.14 8.791±7.03 13.121±6.39
ENST00000461431 N/A 23.325±0.00 N/A 1.703±0.83 136.245±0.00 24.029±0.00 6.181±0.00 4.771±2.64 N/A N/A 1.951±1.18 50.955±0.00 N/A 22.292±0.00
ENST00000469554 N/A N/A N/A N/A 12.413±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479368 N/A N/A N/A 1.349±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 32.545±2.23

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001968 IEA fibronectin binding
GO:0005539 IEA glycosaminoglycan binding
GO:0005604 IEA basement membrane
GO:0005614 IEA interstitial matrix
GO:0008201 IEA heparin binding
GO:0010811 IEA positive regulation of cell-substrate adhesion
GO:0030198 IEA extracellular matrix organization
GO:0031012 IEA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000000002 ccdc80 coiled-coil domain containing 80 protein_coding Danio_rerio
ENSDARG00000030975 ccdc80l1 coiled-coil domain containing 80 like 1 protein_coding Danio_rerio
ENSMUSG00000022665 Ccdc80 coiled-coil domain containing 80 protein_coding Mus_musculus

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