C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 80
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000206423 CCDC80-001 ENSG00000091986 9606 - 3:112604560-112641269 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000206423
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000206423 2.301±0.00 3.471±0.00 1.041±0.00 0.874±0.00 17.315±8.38 10.557±0.00 4.136±0.89 0.976±0.52 43.974±0.00 6.786±2.59 0.989±0.00 19.790±15.94 1.739±0.00 7.809±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001968 IEA fibronectin binding
GO:0005539 IEA glycosaminoglycan binding
GO:0005604 IEA basement membrane
GO:0005614 IEA interstitial matrix
GO:0008201 IEA heparin binding
GO:0010811 IEA positive regulation of cell-substrate adhesion
GO:0030198 IEA extracellular matrix organization
GO:0031012 IEA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000061050 Ccdc80-201 protein_coding Mus_musculus 0 2915
ENSMUST00000099498 Ccdc80-001 protein_coding Mus_musculus 0 2902
ENSDART00000000005 ccdc80-001 protein_coding Danio_rerio 0 333
ENSMUST00000134924 Ccdc80-004 processed_transcript Mus_musculus 2e-40 172
ENSDART00000000004 slc35a5-001 protein_coding Danio_rerio 2e-31 143
ENSMUST00000155800 Ccdc80-005 processed_transcript Mus_musculus 4e-28 132
ENSMUST00000138048 Ccdc80-003 processed_transcript Mus_musculus 4e-28 132

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