C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: unc-13 homolog D (C. elegans)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000092929 UNC13D 9606 - 17:75827225-75844717 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000207549 UNC13D-001 75827225-75844717 protein_coding
  ENST00000412096 UNC13D-004 75827264-75844350 protein_coding
  ENST00000585574 UNC13D-010 75840794-75843755 processed_transcript
  ENST00000586108 UNC13D-006 75842493-75844552 protein_coding
  ENST00000586147 UNC13D-009 75835419-75844360 protein_coding
  ENST00000586519 UNC13D-019 75827957-75830437 nonsense_mediated_decay
  ENST00000586930 UNC13D-015 75831295-75833269 processed_transcript
  ENST00000587105 UNC13D-013 75835717-75840304 nonsense_mediated_decay
  ENST00000587495 UNC13D-011 75840755-75841156 retained_intron
  ENST00000587504 UNC13D-012 75839847-75843744 processed_transcript
  ENST00000588774 UNC13D-007 75843159-75844313 retained_intron
  ENST00000589670 UNC13D-017 75827225-75830147 protein_coding
  ENST00000590762 UNC13D-008 75840225-75843769 protein_coding
  ENST00000590856 UNC13D-018 75829662-75830661 retained_intron
  ENST00000591563 UNC13D-003 75831301-75844418 retained_intron
  ENST00000591616 UNC13D-014 75834325-75835272 retained_intron
  ENST00000592386 UNC13D-016 75840018-75844334 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000207549ENST00000412096ENST00000586147ENST00000587105ENST00000587504ENST00000589670ENST00000590762ENST00000591563ENST00000591616ENST00000592386
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000207549 0.534±0.00 7.223±0.00 N/A 0.189±0.00 0.359±0.18 0.236±0.00 0.243±0.20 0.456±0.39 N/A 14.081±0.00 N/A 4.391±2.23 6.911±2.91 0.449±0.19
ENST00000412096 0.241±0.00 N/A N/A N/A 0.236±0.00 N/A 0.428±0.00 N/A 0.182±0.00 1.036±0.00 0.257±0.00 4.883±2.75 2.541±0.65 0.391±0.00
ENST00000586147 N/A N/A N/A N/A N/A N/A N/A N/A 0.751±0.00 N/A N/A N/A N/A 1.862±0.00
ENST00000587105 N/A N/A N/A N/A 0.998±0.00 N/A 0.194±0.00 0.295±0.00 N/A N/A 0.612±0.00 N/A N/A N/A
ENST00000587504 N/A N/A N/A N/A N/A N/A 0.233±0.00 N/A 0.394±0.00 N/A N/A N/A N/A N/A
ENST00000589670 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.973±0.00 N/A
ENST00000590762 1.019±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591563 N/A N/A 0.280±0.00 0.128±0.06 N/A 0.171±0.01 0.043±0.00 0.116±0.00 N/A N/A N/A 0.565±0.00 N/A N/A
ENST00000591616 N/A N/A N/A 0.243±0.00 N/A N/A N/A 1.151±0.00 0.735±0.00 N/A N/A N/A N/A N/A
ENST00000592386 N/A N/A N/A N/A N/A 1.143±0.00 N/A N/A 0.909±0.00 N/A N/A 9.500±7.98 7.750±0.00 1.340±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00078S CIL_00078S_0001 CGP 17:75784771-75844717
CIL_0008WF CIL_0008WF_0001 VISTA 17:75822026-76422503
CIL_00078T CIL_00078T_0001 CGP 17:75827225-75856507

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002432 IEA granuloma formation
GO:0002467 IEA germinal center formation
GO:0005515 IPI:IEA protein binding
GO:0005764 IDA lysosome
GO:0005768 IEA endosome
GO:0006909 IEA phagocytosis
GO:0016020 IEA membrane
GO:0017137 IDA Rab GTPase binding
GO:0033093 IDA Weibel-Palade body
GO:0043304 IMP regulation of mast cell degranulation
GO:0043320 IEA natural killer cell degranulation
GO:0045921 IMP positive regulation of exocytosis
GO:0051607 IEA defense response to virus
GO:0070382 IDA exocytic vesicle
GO:1903307 IGI positive regulation of regulated secretory pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078249 unc13d unc-13 homolog D (C. elegans) protein_coding Danio_rerio
ENSMUSG00000057948 Unc13d unc-13 homolog D (C. elegans) protein_coding Mus_musculus

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