C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: unc-13 homolog D (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000207549 UNC13D-001 ENSG00000092929 9606 - 17:75827225-75844717 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000207549
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000207549 0.534±0.00 7.223±0.00 0.189±0.00 0.359±0.18 0.236±0.00 0.243±0.20 0.456±0.39 14.081±0.00 4.391±2.23 6.911±2.91 0.449±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00078S CIL_00078S_0001 CGP 17:75784771-75844717
CIL_0008WF CIL_0008WF_0001 VISTA 17:75822026-76422503
CIL_00078T CIL_00078T_0001 CGP 17:75827225-75856507

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002432 IEA granuloma formation
GO:0002467 IEA germinal center formation
GO:0005515 IPI:IEA protein binding
GO:0005764 IDA lysosome
GO:0005768 IEA endosome
GO:0006909 IEA phagocytosis
GO:0016020 IEA membrane
GO:0017137 IDA Rab GTPase binding
GO:0033093 IDA Weibel-Palade body
GO:0043304 IMP regulation of mast cell degranulation
GO:0043320 IEA natural killer cell degranulation
GO:0045921 IMP positive regulation of exocytosis
GO:0051607 IEA defense response to virus
GO:0070382 IDA exocytic vesicle
GO:1903307 IGI positive regulation of regulated secretory pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106451 Unc13d-202 protein_coding Mus_musculus 0 3530
ENSMUST00000106450 Unc13d-001 protein_coding Mus_musculus 0 3530
ENSMUST00000075036 Unc13d-201 protein_coding Mus_musculus 0 3496
ENSMUST00000174822 Unc13d-007 protein_coding Mus_musculus 0 3496
ENSMUST00000173345 Unc13d-004 nonsense_mediated_decay Mus_musculus 0 2697
ENSMUST00000155120 Unc13d-002 processed_transcript Mus_musculus 0 604
ENSMUST00000156545 Unc13d-003 protein_coding Mus_musculus 0 230

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