C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: human immunodeficiency virus type I enhancer binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000095951 HIVEP1 9606 + 6:12008762-12164999 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000379388 HIVEP1-001 12012338-12164999 protein_coding
  ENST00000399469 HIVEP1-003 12125746-12164575 nonsense_mediated_decay
  ENST00000442081 HIVEP1-002 12012491-12161891 protein_coding
  ENST00000478545 HIVEP1-006 12012702-12120180 protein_coding
  ENST00000484210 HIVEP1-007 12015587-12039245 protein_coding
  ENST00000487103 HIVEP1-005 12012000-12120222 protein_coding
  ENST00000491710 HIVEP1-004 12008762-12120157 protein_coding
  ENST00000541134 HIVEP1-201 12012338-12164998 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000379388ENST00000399469ENST00000442081ENST00000491710
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000379388 N/A N/A N/A 0.247±0.00 N/A 1.482±0.00 0.126±0.00 1.284±0.00 0.530±0.34 0.884±0.18 N/A 2.967±0.75 N/A 0.362±0.00
ENST00000399469 3.018±0.00 6.100±0.00 N/A 2.530±0.00 2.433±0.00 1.419±0.00 0.864±0.00 2.440±0.00 1.877±0.00 4.410±0.00 0.827±0.00 2.487±0.97 0.875±0.05 2.370±0.36
ENST00000442081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.973±0.00 2.258±0.00 2.689±0.00
ENST00000491710 N/A N/A 5.309±0.00 N/A 10.240±0.00 N/A 1.225±0.00 N/A N/A N/A N/A 6.513±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00037U CIL_00037U_0001 CGP 6:11712054-12164999
CIL_0008Y7 CIL_0008Y7_0001 VISTA 6:11945112-12546099
CIL_00037V CIL_00037V_0001 CGP 6:12008762-12297194

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion
GO:0006351 IEA transcription, DNA-templated
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079528 hivep1 human immunodeficiency virus type I enhancer binding protein 1 protein_coding Danio_rerio
ENSMUSG00000021366 Hivep1 human immunodeficiency virus type I enhancer binding protein 1 protein_coding Mus_musculus

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