C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: human immunodeficiency virus type I enhancer binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379388 HIVEP1-001 ENSG00000095951 9606 + 6:12012338-12164999 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyLiverLungOvaryTestisENST00000379388
Transcript ID Brain Colon Heart Kidney Liver Lung Ovary Testis
ENST00000379388 0.247±0.00 1.482±0.00 0.126±0.00 1.284±0.00 0.530±0.34 0.884±0.18 2.967±0.75 0.362±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00037U CIL_00037U_0001 CGP 6:11712054-12164999
CIL_0008Y7 CIL_0008Y7_0001 VISTA 6:11945112-12546099
CIL_00037V CIL_00037V_0001 CGP 6:12008762-12297194

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion
GO:0006351 IEA transcription, DNA-templated
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000060148 Hivep1-201 protein_coding Mus_musculus 0 2418

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