C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008Y7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm235 VISTA 9606 6:11945112-12546099
GeneTranscriptPositionBiotype
ENSG00000078401 (EDN1)
endothelin 1 		ENST00000379375 (EDN1-001) 12290363-12297194 protein_coding
ENSG00000095951 (HIVEP1)
human immunodeficiency virus type I enhancer binding protein 1 		ENST00000379388 (HIVEP1-001) 12012338-12164999 protein_coding
ENST00000399469 (HIVEP1-003) 12125746-12164575 nonsense_mediated_decay
ENST00000442081 (HIVEP1-002) 12012491-12161891 protein_coding
ENST00000478545 (HIVEP1-006) 12012702-12120180 protein_coding
ENST00000484210 (HIVEP1-007) 12015587-12039245 protein_coding
ENST00000487103 (HIVEP1-005) 12012000-12120222 protein_coding
ENST00000491710 (HIVEP1-004) 12008762-12120157 protein_coding
ENST00000541134 (HIVEP1-201) 12012338-12164998 protein_coding
ENSG00000212802 (RPL15P3)
ribosomal protein L15 pseudogene 3 		ENST00000391491 (RPL15P3-001) 12514110-12514724 processed_pseudogene
ENSG00000218893 (SUMO2P12)
SUMO2 pseudogene 12 		ENST00000405924 (SUMO2P12-001) 12319453-12319592 processed_pseudogene
ENSG00000223321 (RN7SKP293)
RNA, 7SK small nuclear pseudogene 293 		ENST00000411389 (RN7SKP293-201) 12406486-12406781 misc_RNA
ENSG00000225102 (RP11-456H18.1)
 ENST00000456036 (RP11-456H18.1-001) 11990343-11992012 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0008Y7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm235 VISTA 10090 13:41958101-42559051
GeneTranscriptPositionBiotype
ENSMUSG00000021366 (Hivep1)
human immunodeficiency virus type I enhancer binding protein 1 		ENSMUST00000060148 (Hivep1-201) 42052021-42185026 protein_coding
ENSMUSG00000021367 (Edn1)
endothelin 1 		ENSMUST00000021796 (Edn1-201) 42301270-42307989 protein_coding
ENSMUSG00000100071 (RP24-87A4.1)
predicted gene 28707 		ENSMUST00000186134 (RP24-87A4.1-001) 42049334-42050287 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008Y7_0001ENSG00000078401ENST00000379375ENSG00000095951ENST00000379388ENST00000399469ENST00000442081ENST00000478545ENST00000484210ENST00000487103ENST00000491710ENST00000541134ENSG00000212802ENST00000391491ENSG00000218893ENST00000405924ENSG00000223321ENST00000411389ENSG00000225102ENST00000456036CIL_0008Y7_0002ENSMUSG00000021366ENSMUST00000060148ENSMUSG00000021367ENSMUST00000021796ENSMUSG00000100071ENSMUST00000186134
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008Y7_0001ENSG00000078401ENST00000379375ENSG00000095951ENST00000379388ENST00000399469ENST00000442081ENST00000491710ENSG00000212802ENST00000391491ENSG00000218893ENST00000405924ENSG00000223321ENST00000411389ENSG00000225102ENST00000456036CIL_0008Y7_0002ENSMUSG00000021366ENSMUST00000060148ENSMUSG00000021367ENSMUST00000021796ENSMUSG00000100071ENSMUST00000186134
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000078401 ENST00000379375 6.832±0.00 6.472±0.00 0.947±0.00 6.555±5.96 2.943±0.80 2.813±1.16 0.849±0.78 2.326±2.31 0.416±0.24 9.034±0.95 1.203±0.97 3.534±2.90 5.919±0.76 6.619±3.25
ENSG00000095951 ENST00000379388 N/A N/A N/A 0.247±0.00 N/A 1.482±0.00 0.126±0.00 1.284±0.00 0.530±0.34 0.884±0.18 N/A 2.967±0.75 N/A 0.362±0.00
ENST00000399469 3.018±0.00 6.100±0.00 N/A 2.530±0.00 2.433±0.00 1.419±0.00 0.864±0.00 2.440±0.00 1.877±0.00 4.410±0.00 0.827±0.00 2.487±0.97 0.875±0.05 2.370±0.36
ENST00000442081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.973±0.00 2.258±0.00 2.689±0.00
ENST00000478545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487103 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491710 N/A N/A 5.309±0.00 N/A 10.240±0.00 N/A 1.225±0.00 N/A N/A N/A N/A 6.513±0.00 N/A N/A
ENST00000541134 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000212802 ENST00000391491 0.064±0.00 0.034±0.00 N/A 1.127±1.01 0.583±0.55 0.463±0.27 0.490±0.00 0.280±0.24 0.240±0.18 0.319±0.22 0.030±0.00 0.970±0.65 0.447±0.25 0.081±0.02
ENSG00000218893 ENST00000405924 N/A 0.126±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.108±0.00
ENSG00000223321 ENST00000411389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.259±0.00
ENSG00000225102 ENST00000456036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.133±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021366 ENSMUST00000060148 6.429±1.35 8.266±0.32 4.239±0.54 7.152±1.27 7.463±1.75 11.840±0.26 2.925±0.60 4.250±0.92 1.555±0.55 9.165±2.51 2.331±0.26 5.582±1.43 3.900±2.32 3.392±1.01
ENSMUSG00000021367 ENSMUST00000021796 3.051±0.64 0.349±0.10 1.505±0.38 0.461±0.05 1.856±0.36 6.282±0.36 1.356±0.20 0.797±0.20 0.322±0.23 9.128±1.91 0.626±0.21 1.948±0.55 1.119±0.99 0.281±0.17
ENSMUSG00000100071 ENSMUST00000186134 0.232±0.10 N/A 0.090±0.00 1.525±0.00 0.202±0.00 N/A 0.119±0.04 0.109±0.00 0.119±0.09 0.125±0.00 0.154±0.06 0.437±0.27 0.067±0.04 0.106±0.01

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