C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: synaptosomal-associated protein, 29kDa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000099940 SNAP29 9606 + 22:20858983-20891218 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000215730 SNAP29-001 20858983-20891218 protein_coding
  ENST00000439214 SNAP29-003 20859483-20887819 protein_coding
  ENST00000490458 SNAP29-002 20859081-20871041 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000215730ENST00000439214
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000215730 8.022±0.00 3.542±0.00 1.296±0.00 4.304±2.51 3.532±1.24 2.092±1.06 4.307±1.35 4.565±2.51 2.634±1.05 2.331±1.69 6.115±2.08 8.351±1.26 9.013±0.22
ENST00000439214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 35.063±2.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003KR CIL_0003KR_0002 CGP 22:20707691-20859417
CIL_0003KQ CIL_0003KQ_0002 CGP 22:20773879-20891218
CIL_0002X5 CIL_0002X5_0001 CGP 22:20858983-20953749

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000046 IMP autophagic vacuole fusion
GO:0005484 TAS SNAP receptor activity
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005813 IDA centrosome
GO:0005886 TAS plasma membrane
GO:0006887 TAS exocytosis
GO:0006903 TAS vesicle targeting
GO:0015031 IEA protein transport
GO:0030054 IEA cell junction
GO:0031201 IDA SNARE complex
GO:0043005 IEA neuron projection
GO:0045202 IEA synapse
GO:0061025 TAS membrane fusion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038518 snap29 synaptosomal-associated protein 29 protein_coding Danio_rerio
ENSMUSG00000022765 Snap29 synaptosomal-associated protein 29 protein_coding Mus_musculus

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