C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: synaptosomal-associated protein 29
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022765 Snap29 10090 + 16:17406003-17430826 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023449 Snap29-001 17406003-17430826 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023449
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023449 8.196±1.24 12.022±0.01 8.378±1.82 15.518±0.00 7.054±1.12 7.935±1.90 3.418±0.41 8.087±0.99 4.091±0.72 7.527±1.67 7.630±0.80 11.330±0.22 13.618±4.24 6.708±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PT CIL_0008PT_0002 VISTA 16:16870677-17470725
CIL_0003KR CIL_0003KR_0003 CGP 16:17280351-17406314
CIL_0003KQ CIL_0003KQ_0003 CGP 16:17331371-17430826
CIL_0002X5 CIL_0002X5_0002 CGP 16:17406003-17486255

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000046 ISS autophagic vacuole fusion
GO:0005737 IEA cytoplasm
GO:0005813 IEA centrosome
GO:0015031 IEA protein transport
GO:0030054 IEA cell junction
GO:0031201 ISS SNARE complex
GO:0043005 IEA neuron projection
GO:0045202 IEA synapse

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038518 snap29 synaptosomal-associated protein 29 protein_coding Danio_rerio
ENSG00000099940 SNAP29 synaptosomal-associated protein, 29kDa protein_coding Homo_sapiens

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