C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003KR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000062823-ENSDARG00000062823 CGP 7955 8:1880283-2020727
GeneTranscriptPositionBiotype
ENSDARG00000021208 (serpind1)
serine (or cysteine) proteinase inhibitor, clade D (heparin cofactor), member 1 		ENSDART00000021820 (serpind1-001) 1948618-1964145 protein_coding
ENSDART00000079073 (serpind1-201) 1948631-1968161 protein_coding
ENSDART00000120252 (serpind1-202) 1951890-1968161 protein_coding
ENSDARG00000062823 (pi4kab)
phosphatidylinositol 4-kinase, catalytic, alpha b 		ENSDART00000091235 (pi4kab-201) 1924249-2020727 protein_coding
ENSDART00000114476 (pi4kab-202) 1880283-2020658 protein_coding
ENSDART00000140077 (pi4kab-001) 1941818-2020727 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0003KR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000241973-ENSG00000241973 CGP 9606 22:20707691-20859417
GeneTranscriptPositionBiotype
ENSG00000099937 (SERPIND1)
serpin peptidase inhibitor, clade D (heparin cofactor), member 1 		ENST00000215727 (SERPIND1-001) 20773879-20787720 protein_coding
ENST00000406799 (SERPIND1-002) 20779181-20787232 protein_coding
ENSG00000099940 (SNAP29)
synaptosomal-associated protein, 29kDa 		ENST00000215730 (SNAP29-001) 20858983-20891218 protein_coding
ENST00000439214 (SNAP29-003) 20859483-20887819 protein_coding
ENST00000490458 (SNAP29-002) 20859081-20871041 retained_intron
ENSG00000234252 (AC007308.6)
 ENST00000430719 (AC007308.6-001) 20723047-20725920 antisense
ENSG00000241973 (PI4KA)
phosphatidylinositol 4-kinase, catalytic, alpha 		ENST00000255882 (PI4KA-001) 20707691-20858812 protein_coding
ENST00000399213 (PI4KA-006) 20707719-20721418 protein_coding
ENST00000449120 (PI4KA-007) 20824347-20859417 protein_coding
ENST00000462210 (PI4KA-015) 20733736-20734495 retained_intron
ENST00000466162 (PI4KA-010) 20753146-20793374 processed_transcript
ENST00000466394 (PI4KA-018) 20711302-20717844 retained_intron
ENST00000466772 (PI4KA-004) 20707704-20727357 retained_intron
ENST00000475414 (PI4KA-012) 20747484-20751680 retained_intron
ENST00000477245 (PI4KA-003) 20707703-20734667 retained_intron
ENST00000477368 (PI4KA-014) 20734477-20736866 processed_transcript
ENST00000482030 (PI4KA-019) 20710752-20712993 retained_intron
ENST00000484220 (PI4KA-009) 20764615-20796158 retained_intron
ENST00000485123 (PI4KA-016) 20727569-20729471 retained_intron
ENST00000485950 (PI4KA-008) 20798940-20802018 retained_intron
ENST00000485963 (PI4KA-002) 20798478-20858812 retained_intron
ENST00000489966 (PI4KA-017) 20726316-20727293 retained_intron
ENST00000492581 (PI4KA-005) 20707693-20722009 retained_intron
ENST00000494113 (PI4KA-013) 20734477-20742917 retained_intron

Homo sapiens Ensembl (GRCh38)

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CIL_0003KR_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041720-ENSMUSG00000041720 CGP 10090 16:17280351-17406314
GeneTranscriptPositionBiotype
ENSMUSG00000022765 (Snap29)
synaptosomal-associated protein 29 		ENSMUST00000023449 (Snap29-001) 17406003-17430826 protein_coding
ENSMUSG00000022766 (Serpind1)
serine (or cysteine) peptidase inhibitor, clade D, member 1 		ENSMUST00000023450 (Serpind1-001) 17331371-17343575 protein_coding
ENSMUST00000161034 (Serpind1-002) 17331383-17343574 protein_coding
ENSMUSG00000041720 (Pi4ka)
phosphatidylinositol 4-kinase, catalytic, alpha polypeptide 		ENSMUST00000036161 (Pi4ka-001) 17280351-17406314 protein_coding
ENSMUST00000127121 (Pi4ka-003) 17280352-17284963 retained_intron
ENSMUST00000128938 (Pi4ka-002) 17364658-17405893 retained_intron
ENSMUST00000132152 (Pi4ka-009) 17282822-17284125 retained_intron
ENSMUST00000132300 (Pi4ka-004) 17322927-17350794 retained_intron
ENSMUST00000139404 (Pi4ka-011) 17280352-17281645 retained_intron
ENSMUST00000139768 (Pi4ka-006) 17308219-17325444 nonsense_mediated_decay
ENSMUST00000142876 (Pi4ka-008) 17297584-17307730 nonsense_mediated_decay
ENSMUST00000148110 (Pi4ka-010) 17280353-17282075 retained_intron
ENSMUST00000149309 (Pi4ka-005) 17312431-17350832 protein_coding
ENSMUST00000154364 (Pi4ka-012) 17280352-17405893 protein_coding
ENSMUST00000155928 (Pi4ka-007) 17280352-17308107 protein_coding
ENSMUSG00000065331 (Gm24927)
predicted gene, 24927 		ENSMUST00000083397 (Gm24927-201) 17341906-17342012 snRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003KR_0001ENSDARG00000021208ENSDART00000021820ENSDART00000079073ENSDART00000120252ENSDARG00000062823ENSDART00000091235ENSDART00000114476ENSDART00000140077CIL_0003KR_0002ENSG00000099937ENST00000215727ENST00000406799ENSG00000099940ENST00000215730ENST00000439214ENST00000490458ENSG00000234252ENST00000430719ENSG00000241973ENST00000255882ENST00000399213ENST00000449120ENST00000462210ENST00000466162ENST00000466394ENST00000466772ENST00000475414ENST00000477245ENST00000477368ENST00000482030ENST00000484220ENST00000485123ENST00000485950ENST00000485963ENST00000489966ENST00000492581ENST00000494113CIL_0003KR_0003ENSMUSG00000022765ENSMUST00000023449ENSMUSG00000022766ENSMUST00000023450ENSMUST00000161034ENSMUSG00000041720ENSMUST00000036161ENSMUST00000127121ENSMUST00000128938ENSMUST00000132152ENSMUST00000132300ENSMUST00000139404ENSMUST00000139768ENSMUST00000142876ENSMUST00000148110ENSMUST00000149309ENSMUST00000154364ENSMUST00000155928ENSMUSG00000065331ENSMUST00000083397
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003KR_0001ENSDARG00000021208ENSDART00000021820ENSDART00000079073ENSDART00000120252ENSDARG00000062823ENSDART00000091235ENSDART00000114476CIL_0003KR_0002ENSG00000099937ENST00000215727ENST00000406799ENSG00000099940ENST00000215730ENST00000439214ENSG00000234252ENST00000430719ENSG00000241973ENST00000255882ENST00000399213ENST00000485963CIL_0003KR_0003ENSMUSG00000022765ENSMUST00000023449ENSMUSG00000022766ENSMUST00000023450ENSMUST00000161034ENSMUSG00000041720ENSMUST00000036161ENSMUST00000127121ENSMUST00000139768ENSMUST00000154364ENSMUSG00000065331ENSMUST00000083397
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000021208 ENSDART00000021820 N/A N/A N/A N/A N/A N/A N/A 27.974±15.01 25.909±0.00 N/A N/A N/A N/A N/A
ENSDART00000079073 N/A N/A N/A N/A N/A N/A N/A 12.357±1.26 N/A N/A 0.479±0.00 N/A N/A N/A
ENSDART00000120252 N/A N/A N/A 1.287±0.71 N/A N/A 1.507±0.63 14.420±3.25 21.219±0.00 N/A 1.089±0.00 N/A N/A N/A
ENSDARG00000062823 ENSDART00000091235 N/A N/A N/A 1.861±0.00 N/A N/A 5.720±3.87 6.113±3.28 N/A N/A N/A N/A N/A N/A
ENSDART00000114476 N/A N/A N/A 4.820±0.00 N/A N/A 0.411±0.00 N/A 0.601±0.00 N/A 0.781±0.00 N/A N/A N/A
ENSDART00000140077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000099937 ENST00000215727 0.099±0.00 0.176±0.00 N/A 0.409±0.00 0.018±0.00 N/A 0.058±0.02 117.858±117.81 103.270±0.00 1.083±0.00 N/A 0.530±0.32 0.715±0.72 0.246±0.19
ENST00000406799 N/A N/A 0.055±0.00 0.985±0.00 0.267±0.11 0.026±0.00 0.059±0.02 N/A N/A N/A 0.025±0.00 0.077±0.00 0.098±0.00 N/A
ENSG00000099940 ENST00000215730 8.022±0.00 3.542±0.00 1.296±0.00 N/A 4.304±2.51 3.532±1.24 2.092±1.06 4.307±1.35 4.565±2.51 2.634±1.05 2.331±1.69 6.115±2.08 8.351±1.26 9.013±0.22
ENST00000439214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 35.063±2.16
ENST00000490458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000234252 ENST00000430719 0.372±0.00 0.704±0.00 0.069±0.00 0.249±0.22 0.274±0.25 0.144±0.13 0.134±0.07 0.437±0.00 0.076±0.04 0.248±0.15 0.319±0.00 0.068±0.06 0.055±0.03 0.239±0.09
ENSG00000241973 ENST00000255882 7.982±0.00 10.898±0.00 N/A 22.739±6.53 5.064±1.61 4.172±1.53 3.862±3.40 3.716±0.00 4.813±1.87 4.601±1.85 12.303±0.00 8.376±4.33 9.071±1.34 18.162±0.16
ENST00000399213 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.388±0.00 N/A N/A
ENST00000449120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466772 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482030 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485123 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485963 N/A N/A N/A 16.661±0.00 4.396±0.00 2.508±0.00 1.463±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000489966 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494113 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022765 ENSMUST00000023449 8.196±1.24 12.022±0.01 8.378±1.82 15.518±0.00 7.054±1.12 7.935±1.90 3.418±0.41 8.087±0.99 4.091±0.72 7.527±1.67 7.630±0.80 11.330±0.22 13.618±4.24 6.708±0.00
ENSMUSG00000022766 ENSMUST00000023450 0.157±0.01 0.047±0.00 0.088±0.00 0.040±0.00 0.687±0.10 N/A 0.111±0.02 0.316±0.00 117.592±50.52 0.652±0.29 N/A 0.143±0.00 14.925±10.39 0.038±0.01
ENSMUST00000161034 0.258±0.13 0.238±0.04 0.051±0.01 0.391±0.12 0.299±0.06 0.145±0.05 0.189±0.10 0.378±0.03 88.943±19.09 0.589±0.12 0.075±0.03 0.200±0.13 13.220±15.32 0.080±0.05
ENSMUSG00000041720 ENSMUST00000036161 14.599±2.35 N/A 9.935±1.61 20.334±7.58 8.850±2.29 7.234±2.00 6.144±0.74 14.432±3.88 3.002±1.17 8.032±2.81 1.653±0.58 12.244±5.07 6.857±3.10 17.121±4.66
ENSMUST00000127121 N/A N/A N/A 70.392±0.00 N/A N/A N/A 16.065±1.40 N/A N/A N/A 17.504±0.00 N/A N/A
ENSMUST00000128938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132300 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139768 N/A N/A N/A 115.162±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154364 3.652±0.00 13.662±2.47 4.795±0.03 10.792±0.09 4.991±0.73 3.209±0.31 1.653±0.15 2.999±0.33 2.257±0.96 N/A 2.427±0.71 6.634±2.02 3.849±0.06 7.807±0.11
ENSMUST00000155928 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000065331 ENSMUST00000083397 N/A N/A N/A N/A N/A N/A N/A N/A 32.952±0.00 N/A N/A N/A N/A N/A

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