C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: histone cell cycle regulator
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100084 HIRA 9606 - 22:19330698-19447450 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263208 HIRA-001 19330698-19431733 protein_coding
  ENST00000340170 HIRA-002 19330698-19431696 protein_coding
  ENST00000452818 HIRA-004 19398068-19447450 nonsense_mediated_decay
  ENST00000464189 HIRA-003 19398061-19430263 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263208
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263208 5.224±0.00 9.506±0.00 5.064±2.00 6.285±3.75 4.921±2.40 4.503±3.61 14.764±0.00 7.155±4.78 4.101±1.44 20.866±0.00 10.089±5.37 7.069±0.26 9.523±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000790 IDA nuclear chromatin
GO:0001649 IEA osteoblast differentiation
GO:0003682 IEA chromatin binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0003714 TAS transcription corepressor activity
GO:0005515 IPI:IEA protein binding
GO:0005634 TAS:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006336 IDA DNA replication-independent nucleosome assembly
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0007369 IEA gastrulation
GO:0009653 TAS anatomical structure morphogenesis
GO:0016568 IEA chromatin modification
GO:0042692 IEA muscle cell differentiation
GO:0043234 IDA protein complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013434 hira HIR histone cell cycle regulation defective homolog A (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000022702 Hira histone cell cycle regulation defective homolog A (S. cerevisiae) protein_coding Mus_musculus

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