C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: MICAL-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100139 MICALL1 9606 + 22:37905657-37942822 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000215957 MICALL1-001 37906297-37942822 protein_coding
  ENST00000402631 MICALL1-004 37926563-37942009 processed_transcript
  ENST00000424008 MICALL1-005 37932595-37941187 protein_coding
  ENST00000445494 MICALL1-002 37905657-37922286 protein_coding
  ENST00000454685 MICALL1-006 37925847-37937153 protein_coding
  ENST00000489812 MICALL1-003 37906882-37922036 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000215957ENST00000402631ENST00000424008ENST00000445494ENST00000454685
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000215957 9.114±0.00 8.498±0.00 1.787±1.31 1.647±0.00 4.186±3.27 1.667±1.56 3.814±0.00 1.257±0.00 3.925±3.50 2.181±0.00 5.694±3.03 16.085±8.33 7.051±0.12
ENST00000402631 N/A N/A 0.392±0.00 N/A N/A 0.103±0.00 N/A 0.567±0.00 N/A N/A 5.757±4.35 21.196±11.31 13.874±0.00
ENST00000424008 N/A N/A 6.383±0.00 N/A 1.770±0.00 N/A N/A 1.440±0.00 1.354±0.00 N/A 4.642±0.00 N/A 6.448±0.00
ENST00000445494 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.887±0.00 N/A N/A N/A
ENST00000454685 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.810±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099H CIL_00099H_0001 VISTA 22:37683926-38284300
CIL_0008KJ CIL_0008KJ_0001 VISTA 22:37685616-38286450
CIL_0008BX CIL_0008BX_0001 VISTA 22:37696030-38296592
CIL_0008KA CIL_0008KA_0001 VISTA 22:37698338-38299192
CIL_00082J CIL_00082J_0001 VISTA 22:37733233-38334508
CIL_0008C1 CIL_0008C1_0001 VISTA 22:37746133-38346872
CIL_00082K CIL_00082K_0001 VISTA 22:37750385-38350990
CIL_0003QI CIL_0003QI_0001 CGP 22:37848868-37942822
CIL_0008MM CIL_0008MM_0001 VISTA 22:37872841-38473542
CIL_0006F9 CIL_0006F9_0002 CGP 22:37905657-37953669

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005770 IDA late endosome
GO:0006612 IMP protein targeting to membrane
GO:0006897 IMP endocytosis
GO:0006898 IMP receptor-mediated endocytosis
GO:0008270 IEA zinc ion binding
GO:0010008 IEA endosome membrane
GO:0017137 IPI Rab GTPase binding
GO:0019898 IDA extrinsic component of membrane
GO:0031175 ISS neuron projection development
GO:0032456 IEA endocytic recycling
GO:0032458 IMP slow endocytic recycling
GO:0036010 IMP protein localization to endosome
GO:0042802 IPI identical protein binding
GO:0055038 IDA recycling endosome membrane
GO:0070300 IDA phosphatidic acid binding
GO:0097320 IDA membrane tubulation
GO:1990090 IEA cellular response to nerve growth factor stimulus
GO:1990126 IMP retrograde transport, endosome to plasma membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040502 MICALL1 (1 of 3) MICAL-like 1 protein_coding Danio_rerio
ENSDARG00000079811 micall1 MICAL-like 1 protein_coding Danio_rerio
ENSDARG00000087016 MICALL1 (3 of 3) MICAL-like 1 protein_coding Danio_rerio
ENSMUSG00000033039 Micall1 microtubule associated monooxygenase, calponin and LIM domain containing -like 1 protein_coding Mus_musculus

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