C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006F9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000079811-ENSDARG00000052428 CGP 7955 6:23220759-23266970
GeneTranscriptPositionBiotype
ENSDARG00000052428 (C6H22orf23)
chromosome 22 open reading frame 23 		ENSDART00000074281 (C6H22orf23-201) 23260036-23266666 protein_coding
ENSDART00000151321 (C6H22orf23-002) 23262192-23266970 processed_transcript
ENSDART00000151339 (C6H22orf23-001) 23260496-23266969 protein_coding
ENSDARG00000079811 (micall1)
MICAL-like 1 		ENSDART00000113911 (micall1-001) 23220759-23255309 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0006F9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100139-ENSG00000128346 CGP 9606 22:37905657-37953669
GeneTranscriptPositionBiotype
ENSG00000100139 (MICALL1)
MICAL-like 1 		ENST00000215957 (MICALL1-001) 37906297-37942822 protein_coding
ENST00000402631 (MICALL1-004) 37926563-37942009 processed_transcript
ENST00000424008 (MICALL1-005) 37932595-37941187 protein_coding
ENST00000445494 (MICALL1-002) 37905657-37922286 protein_coding
ENST00000454685 (MICALL1-006) 37925847-37937153 protein_coding
ENST00000489812 (MICALL1-003) 37906882-37922036 processed_transcript
ENSG00000278948 (RP5-1039K5.12)
 ENST00000624344 (RP5-1039K5.12-001) 37943050-37944898 TEC
ENSG00000279010 (MIR4534)
microRNA 6820 		ENST00000623111 (MIR4534-001) 37948352-38002889 sense_overlapping

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0006F9_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033039-ENSMUSG00000033029 CGP 10090 15:79108972-79141253
GeneTranscriptPositionBiotype
ENSMUSG00000033029 (1700088E04Rik)
RIKEN cDNA 1700088E04 gene 		ENSMUST00000169604 (1700088E04Rik-001) 79134661-79141253 protein_coding
ENSMUST00000185944 (1700088E04Rik-007) 79129349-79134916 processed_transcript
ENSMUST00000186053 (1700088E04Rik-002) 79137423-79141253 protein_coding
ENSMUST00000186459 (1700088E04Rik-005) 79137132-79141203 nonsense_mediated_decay
ENSMUST00000186559 (1700088E04Rik-006) 79135009-79136713 processed_transcript
ENSMUST00000187550 (1700088E04Rik-008) 79134655-79141187 protein_coding
ENSMUST00000188562 (1700088E04Rik-012) 79135056-79141205 protein_coding
ENSMUST00000189761 (1700088E04Rik-009) 79135082-79141182 nonsense_mediated_decay
ENSMUST00000190400 (1700088E04Rik-013) 79137425-79140978 protein_coding
ENSMUST00000190509 (1700088E04Rik-011) 79134992-79141230 protein_coding
ENSMUST00000190730 (1700088E04Rik-010) 79135017-79141234 protein_coding
ENSMUST00000190959 (1700088E04Rik-003) 79134655-79141239 protein_coding
ENSMUST00000191006 (1700088E04Rik-014) 79137420-79139275 protein_coding
ENSMUSG00000033039 (Micall1)
microtubule associated monooxygenase, calponin and LIM domain containing -like 1 		ENSMUST00000040320 (Micall1-201) 79108972-79136897 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006F9_0001ENSDARG00000052428ENSDART00000074281ENSDART00000151321ENSDART00000151339ENSDARG00000079811ENSDART00000113911CIL_0006F9_0002ENSG00000100139ENST00000215957ENST00000402631ENST00000424008ENST00000445494ENST00000454685ENST00000489812ENSG00000278948ENST00000624344ENSG00000279010ENST00000623111CIL_0006F9_0003ENSMUSG00000033029ENSMUST00000169604ENSMUST00000185944ENSMUST00000186053ENSMUST00000186459ENSMUST00000186559ENSMUST00000187550ENSMUST00000188562ENSMUST00000189761ENSMUST00000190400ENSMUST00000190509ENSMUST00000190730ENSMUST00000190959ENSMUST00000191006ENSMUSG00000033039ENSMUST00000040320
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006F9_0001ENSDARG00000052428ENSDART00000074281ENSDARG00000079811ENSDART00000113911CIL_0006F9_0002ENSG00000100139ENST00000215957ENST00000402631ENST00000424008ENST00000445494ENST00000454685ENSG00000278948ENST00000624344ENSG00000279010ENST00000623111CIL_0006F9_0003ENSMUSG00000033029ENSMUST00000169604ENSMUST00000185944ENSMUST00000186559ENSMUST00000187550ENSMUSG00000033039ENSMUST00000040320
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000052428 ENSDART00000074281 N/A N/A N/A N/A N/A N/A 5.674±0.00 3.225±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000151321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000151339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000079811 ENSDART00000113911 N/A N/A N/A 1.458±0.59 N/A N/A 0.714±0.37 1.391±0.00 0.331±0.00 N/A 0.512±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100139 ENST00000215957 9.114±0.00 8.498±0.00 N/A 1.787±1.31 1.647±0.00 4.186±3.27 1.667±1.56 3.814±0.00 1.257±0.00 3.925±3.50 2.181±0.00 5.694±3.03 16.085±8.33 7.051±0.12
ENST00000402631 N/A N/A N/A 0.392±0.00 N/A N/A 0.103±0.00 N/A 0.567±0.00 N/A N/A 5.757±4.35 21.196±11.31 13.874±0.00
ENST00000424008 N/A N/A N/A 6.383±0.00 N/A 1.770±0.00 N/A N/A 1.440±0.00 1.354±0.00 N/A 4.642±0.00 N/A 6.448±0.00
ENST00000445494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.887±0.00 N/A N/A N/A
ENST00000454685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.810±0.00 N/A N/A N/A
ENST00000489812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000278948 ENST00000624344 N/A N/A 0.863±0.00 N/A N/A 8.311±0.00 N/A N/A N/A 2.641±0.98 0.741±0.00 1.680±0.00 7.082±2.63 21.978±0.00
ENSG00000279010 ENST00000623111 0.471±0.00 0.657±0.00 0.058±0.00 1.094±0.00 0.339±0.23 0.270±0.13 0.119±0.06 0.363±0.00 0.201±0.09 0.139±0.05 0.126±0.00 0.206±0.13 N/A 0.549±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033029 ENSMUST00000169604 N/A N/A N/A N/A N/A N/A N/A 8.238±0.30 N/A 13.298±1.23 N/A 14.445±0.12 N/A 49.914±3.86
ENSMUST00000185944 N/A N/A N/A 4.422±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 6.321±0.76 15.538±0.00
ENSMUST00000186053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186459 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186559 N/A N/A N/A N/A 10.747±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.861±0.21 N/A N/A N/A
ENSMUST00000188562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000033039 ENSMUST00000040320 16.726±6.80 19.690±4.85 25.527±1.41 8.299±1.92 12.318±4.31 7.951±0.98 11.883±2.55 7.027±1.61 1.789±0.75 10.904±1.49 2.486±0.67 12.532±3.98 12.826±9.89 17.979±3.50

Loading