C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, matrin-type 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100319 ZMAT5 9606 - 22:29730956-29767011 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000344318 ZMAT5-001 29730956-29766961 protein_coding
  ENST00000489010 ZMAT5-002 29746167-29767011 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000344318ENST00000489010
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000344318 1.194±0.00 13.865±0.00 0.400±0.00 3.853±0.64 4.196±0.00 1.583±1.27 1.464±1.42 9.037±6.25 1.880±0.00 4.804±4.11 2.402±0.00 7.578±1.88 6.847±0.30 17.483±0.00
ENST00000489010 N/A 0.933±0.00 N/A N/A N/A 0.016±0.00 0.055±0.00 N/A N/A N/A N/A 0.053±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005689 IDA U12-type spliceosomal complex
GO:0006397 IEA mRNA processing
GO:0008270 IEA zinc ion binding
GO:0008380 IC RNA splicing
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035434 zmat5 zinc finger, matrin type 5 protein_coding Danio_rerio
ENSMUSG00000009076 Zmat5 zinc finger, matrin type 5 protein_coding Mus_musculus

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