C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, matrin-type 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000344318 ZMAT5-001 ENSG00000100319 9606 - 22:29730956-29766961 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000344318
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000344318 1.194±0.00 13.865±0.00 0.400±0.00 3.853±0.64 4.196±0.00 1.583±1.27 1.464±1.42 9.037±6.25 1.880±0.00 4.804±4.11 2.402±0.00 7.578±1.88 6.847±0.30 17.483±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005689 IDA U12-type spliceosomal complex
GO:0006397 IEA mRNA processing
GO:0008270 IEA zinc ion binding
GO:0008380 IC RNA splicing
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000009220 Zmat5-001 protein_coding Mus_musculus 0 702
ENSMUST00000154341 Zmat5-003 processed_transcript Mus_musculus 0 425
ENSMUST00000141970 Zmat5-002 processed_transcript Mus_musculus 0 331
ENSMUST00000009219 Cabp7-001 protein_coding Mus_musculus 2e-39 167

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