C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, matrin type 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000009076 Zmat5 10090 + 11:4704678-4737669 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000009220 Zmat5-001 4704678-4737669 protein_coding
  ENSMUST00000141970 Zmat5-002 4728585-4732523 processed_transcript
  ENSMUST00000154341 Zmat5-003 4704708-4737395 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000009220ENSMUST00000141970ENSMUST00000154341
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000009220 5.143±1.47 7.738±4.33 21.206±3.20 13.401±5.35 7.871±3.44 12.107±2.57 9.953±0.77 13.493±3.98 5.774±3.41 10.977±3.87 8.236±2.34 10.476±3.21 9.464±2.89 7.081±2.01
ENSMUST00000141970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.940±0.00
ENSMUST00000154341 N/A 5.839±0.93 N/A N/A 6.613±0.00 8.381±2.58 3.773±0.00 6.979±0.00 1.518±0.00 6.740±0.38 N/A 9.681±4.48 4.700±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00029V CIL_00029V_0002 CGP 11:4704678-4746778

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005689 ISS U12-type spliceosomal complex
GO:0006397 IEA mRNA processing
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0008380 IEA RNA splicing

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035434 zmat5 zinc finger, matrin type 5 protein_coding Danio_rerio
ENSG00000100319 ZMAT5 zinc finger, matrin-type 5 protein_coding Homo_sapiens

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