C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100413 POLR3H 9606 - 22:41525804-41544606 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000337566 POLR3H-007 41528842-41544462 protein_coding
  ENST00000355209 POLR3H-001 41525826-41544445 protein_coding
  ENST00000396504 POLR3H-201 41525804-41544489 protein_coding
  ENST00000407461 POLR3H-005 41529212-41544606 protein_coding
  ENST00000420561 POLR3H-009 41532625-41544386 processed_transcript
  ENST00000431534 POLR3H-004 41528843-41544455 nonsense_mediated_decay
  ENST00000432789 POLR3H-006 41528865-41544427 nonsense_mediated_decay
  ENST00000442616 POLR3H-008 41532119-41544460 nonsense_mediated_decay
  ENST00000483837 POLR3H-002 41539143-41544472 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000337566ENST00000355209ENST00000396504
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000337566 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.888±0.00
ENST00000355209 15.388±0.00 20.214±0.00 25.440±0.00 18.018±0.00 7.561±0.00 N/A 16.129±0.00 15.128±0.00 13.793±6.02 12.878±0.24 14.301±0.00
ENST00000396504 N/A N/A 8.044±0.00 N/A 4.084±0.00 32.662±27.87 8.045±6.02 3.173±1.75 8.451±5.03 12.370±0.00 8.608±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00065P CIL_00065P_0001 CGP 22:41459717-41528989
CIL_00065O CIL_00065O_0001 CGP 22:41469125-41544606
CIL_0000V8 CIL_0000V8_0002 CGP 22:41525804-41577741

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001056 IBA RNA polymerase III activity
GO:0003677 IEA DNA binding
GO:0003899 IDA:IEA DNA-directed RNA polymerase activity
GO:0005634 IDA nucleus
GO:0005654 IDA nucleoplasm
GO:0005666 IDA DNA-directed RNA polymerase III complex
GO:0005813 IDA centrosome
GO:0005829 TAS cytosol
GO:0006139 IDA nucleobase-containing compound metabolic process
GO:0006351 IEA transcription, DNA-templated
GO:0006383 IDA transcription from RNA polymerase III promoter
GO:0006384 IBA transcription initiation from RNA polymerase III promoter
GO:0006385 TAS transcription elongation from RNA polymerase III promoter
GO:0006386 TAS termination of RNA polymerase III transcription
GO:0010467 TAS gene expression
GO:0032481 TAS positive regulation of type I interferon production
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0045087 TAS innate immune response
GO:0051607 IEA defense response to virus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038399 polr3h polymerase (RNA) III (DNA directed) polypeptide H protein_coding Danio_rerio
ENSMUSG00000022476 Polr3h polymerase (RNA) III (DNA directed) polypeptide H protein_coding Mus_musculus

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