C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphorylase, glycogen, liver
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100504 PYGL 9606 - 14:50857891-50944736 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000216392 PYGL-001 50905221-50944736 protein_coding
  ENST00000528757 PYGL-011 50915190-50915940 retained_intron
  ENST00000530336 PYGL-004 50923237-50944470 retained_intron
  ENST00000532107 PYGL-006 50908142-50911871 retained_intron
  ENST00000532462 PYGL-003 50857891-50944456 protein_coding
  ENST00000544180 PYGL-002 50905218-50944483 protein_coding
  ENST00000553872 PYGL-010 50917016-50921528 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000216392ENST00000528757ENST00000530336ENST00000532107ENST00000532462ENST00000544180
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000216392 12.526±0.00 3.655±0.00 N/A 1.302±1.23 33.376±31.13 2.772±0.88 0.860±0.30 9.656±6.38 8.686±2.68 6.582±0.00 0.570±0.00 7.050±4.06 20.373±13.63 3.037±1.07
ENST00000528757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.359±0.00 N/A N/A N/A
ENST00000530336 N/A N/A N/A 0.935±0.00 2.306±0.00 N/A N/A N/A N/A N/A N/A 1.667±0.00 N/A N/A
ENST00000532107 N/A N/A N/A 0.734±0.00 N/A N/A 0.480±0.00 N/A N/A N/A 1.602±0.00 N/A N/A N/A
ENST00000532462 N/A N/A N/A N/A 0.815±0.00 N/A N/A N/A N/A N/A 0.285±0.00 N/A N/A N/A
ENST00000544180 13.771±0.00 5.661±0.00 0.142±0.00 1.186±0.00 28.037±26.50 9.712±0.00 1.661±0.00 3.834±0.00 21.764±0.00 13.070±0.00 1.095±0.00 6.124±0.21 16.085±3.24 4.527±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069K CIL_00069K_0002 CGP 14:50719763-50944736

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002060 IDA purine nucleobase binding
GO:0004645 IEA phosphorylase activity
GO:0005515 IEA protein binding
GO:0005524 IDA ATP binding
GO:0005536 NAS glucose binding
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005886 IDA plasma membrane
GO:0005975 TAS:IEA carbohydrate metabolic process
GO:0005977 IMP glycogen metabolic process
GO:0005980 TAS glycogen catabolic process
GO:0006006 TAS glucose metabolic process
GO:0006015 IEA 5-phosphoribose 1-diphosphate biosynthetic process
GO:0008144 IDA drug binding
GO:0008184 IMP:IEA glycogen phosphorylase activity
GO:0016208 IDA AMP binding
GO:0019842 IDA vitamin binding
GO:0030170 IEA pyridoxal phosphate binding
GO:0030246 IEA carbohydrate binding
GO:0032052 IDA bile acid binding
GO:0042593 IMP glucose homeostasis
GO:0042803 NAS protein homodimerization activity
GO:0044281 TAS small molecule metabolic process
GO:0070062 IDA extracellular vesicular exosome
GO:0070266 IEA necroptotic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002197 pygl phosphorylase, glycogen; liver (Hers disease, glycogen storage disease type VI) protein_coding Danio_rerio
ENSMUSG00000021069 Pygl liver glycogen phosphorylase protein_coding Mus_musculus

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