C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphorylase, glycogen, liver
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000544180 PYGL-002 ENSG00000100504 9606 - 14:50905218-50944483 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000544180
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000544180 13.771±0.00 5.661±0.00 0.142±0.00 1.186±0.00 28.037±26.50 9.712±0.00 1.661±0.00 3.834±0.00 21.764±0.00 13.070±0.00 1.095±0.00 6.124±0.21 16.085±3.24 4.527±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069K CIL_00069K_0002 CGP 14:50719763-50944736

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002060 IDA purine nucleobase binding
GO:0004645 IEA phosphorylase activity
GO:0005524 IDA ATP binding
GO:0005536 NAS glucose binding
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005886 IDA plasma membrane
GO:0005975 TAS:IEA carbohydrate metabolic process
GO:0005977 IMP glycogen metabolic process
GO:0005980 TAS glycogen catabolic process
GO:0006006 TAS glucose metabolic process
GO:0008144 IDA drug binding
GO:0008184 IMP:IEA glycogen phosphorylase activity
GO:0016208 IDA AMP binding
GO:0019842 IDA vitamin binding
GO:0030170 IEA pyridoxal phosphate binding
GO:0032052 IDA bile acid binding
GO:0042593 IMP glucose homeostasis
GO:0042803 NAS protein homodimerization activity
GO:0044281 TAS small molecule metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161083 Pygl-002 protein_coding Mus_musculus 0 2645
ENSMUST00000071250 Pygl-001 protein_coding Mus_musculus 0 2645
ENSMUST00000035269 Pygm-001 protein_coding Mus_musculus 0 1096
ENSMUST00000113483 Pygm-004 protein_coding Mus_musculus 0 1002
ENSMUST00000161840 Pygl-003 retained_intron Mus_musculus 0 401
ENSMUST00000162613 Pygl-004 processed_transcript Mus_musculus 0 291
ENSMUST00000166609 Pygl-005 processed_transcript Mus_musculus 0 265
ENSDART00000023449 pygl-201 protein_coding Danio_rerio 0 228
ENSDART00000149011 pygl-001 protein_coding Danio_rerio 0 228

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