C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: liver glycogen phosphorylase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021069 Pygl 10090 - 12:70190811-70231488 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000071250 Pygl-001 70190811-70227683 protein_coding
  ENSMUST00000161083 Pygl-002 70190819-70231488 protein_coding
  ENSMUST00000161840 Pygl-003 70210791-70227612 retained_intron
  ENSMUST00000162613 Pygl-004 70197399-70197841 processed_transcript
  ENSMUST00000166609 Pygl-005 70214348-70227345 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000071250ENSMUST00000161083ENSMUST00000161840ENSMUST00000166609
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000071250 76.608±24.03 40.701±11.60 12.264±0.29 2.241±0.21 57.262±11.75 4.031±0.77 4.353±1.42 15.793±1.07 95.535±48.88 16.033±1.57 0.499±0.26 12.235±4.93 28.646±10.39 1.247±0.33
ENSMUST00000161083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.095±0.00 N/A N/A N/A
ENSMUST00000161840 48.184±7.38 65.003±10.13 N/A N/A 85.412±33.52 2.548±0.48 3.795±1.51 15.347±1.78 143.418±16.27 17.603±4.01 N/A 8.252±1.83 N/A N/A
ENSMUST00000166609 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.157±0.00 13.308±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003CU CIL_0003CU_0002 CGP 12:70190811-70347614

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002060 IEA purine nucleobase binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0005977 IDA glycogen metabolic process
GO:0005980 IEA glycogen catabolic process
GO:0006015 IEA 5-phosphoribose 1-diphosphate biosynthetic process
GO:0008144 IEA drug binding
GO:0008184 IDA glycogen phosphorylase activity
GO:0016208 IEA AMP binding
GO:0019842 IEA vitamin binding
GO:0030170 IEA pyridoxal phosphate binding
GO:0030246 IEA carbohydrate binding
GO:0032052 IEA bile acid binding
GO:0042593 IEA glucose homeostasis
GO:0042803 IEA protein homodimerization activity
GO:0070062 IEA extracellular vesicular exosome
GO:0070266 IGI necroptotic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002197 pygl phosphorylase, glycogen; liver (Hers disease, glycogen storage disease type VI) protein_coding Danio_rerio
ENSG00000100504 PYGL phosphorylase, glycogen, liver protein_coding Homo_sapiens

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