C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: eukaryotic translation initiation factor 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100664 EIF5 9606 + 14:103333544-103345025 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000216554 EIF5-001 103334002-103345025 protein_coding
  ENST00000392715 EIF5-002 103334861-103342640 protein_coding
  ENST00000558265 EIF5-011 103334392-103338750 protein_coding
  ENST00000558316 EIF5-010 103334387-103337227 protein_coding
  ENST00000558506 EIF5-003 103334949-103343228 protein_coding
  ENST00000558551 EIF5-015 103335481-103336886 retained_intron
  ENST00000558800 EIF5-022 103340404-103341356 retained_intron
  ENST00000559011 EIF5-018 103338177-103338824 retained_intron
  ENST00000559130 EIF5-013 103334894-103336728 protein_coding
  ENST00000559249 EIF5-006 103334189-103336178 retained_intron
  ENST00000559532 EIF5-014 103334896-103336849 protein_coding
  ENST00000559923 EIF5-017 103336764-103337737 retained_intron
  ENST00000560200 EIF5-009 103334387-103337227 processed_transcript
  ENST00000560338 EIF5-007 103334192-103336825 protein_coding
  ENST00000560763 EIF5-008 103334237-103336117 protein_coding
  ENST00000560877 EIF5-005 103333544-103335844 processed_transcript
  ENST00000561023 EIF5-021 103336685-103338348 retained_intron
  ENST00000561325 EIF5-012 103334803-103336849 protein_coding
  ENST00000561380 EIF5-019 103338735-103340561 retained_intron
  ENST00000561406 EIF5-020 103340970-103342386 processed_transcript
  ENST00000561439 EIF5-016 103336506-103338851 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000216554ENST00000392715ENST00000558506ENST00000558800ENST00000561439
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000216554 5.629±0.00 N/A 12.235±4.08 N/A 2.386±0.00 1.168±0.00 3.721±0.00 2.263±0.00 2.257±0.00 1.620±0.00 3.347±1.36 N/A 7.091±2.87
ENST00000392715 N/A 2.264±0.00 7.042±0.00 7.218±0.00 7.271±0.00 3.967±0.00 8.783±0.00 6.198±0.00 4.503±0.00 2.923±0.92 6.605±0.78 10.442±0.00 26.397±0.00
ENST00000558506 N/A 2.237±0.00 16.905±14.02 6.037±0.00 1.852±0.00 1.440±0.00 8.988±0.00 5.116±0.00 7.700±0.00 6.468±0.64 13.586±5.73 12.215±0.00 9.496±0.00
ENST00000558800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 48.522±0.00
ENST00000561439 N/A 5.923±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 20.703±0.00 43.252±0.00 70.687±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001AI CIL_0001AI_0002 CGP 14:103123442-103345025
CIL_00016S CIL_00016S_0001 CGP 14:103333544-103503831

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003743 IEA:NAS translation initiation factor activity
GO:0003924 TAS GTPase activity
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0005525 IEA GTP binding
GO:0005737 IDA cytoplasm
GO:0005829 NAS cytosol
GO:0005886 IDA plasma membrane
GO:0006184 TAS GTP catabolic process
GO:0006412 TAS translation
GO:0006413 IEA:NAS translational initiation
GO:0006446 TAS regulation of translational initiation
GO:0008135 TAS translation factor activity, nucleic acid binding
GO:0010467 TAS gene expression
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003681 eif5 eukaryotic translation initiation factor 5 protein_coding Danio_rerio
ENSMUSG00000021282 Eif5 eukaryotic translation initiation factor 5 protein_coding Mus_musculus

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