C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: apoptotic chromatin condensation inducer 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100813 ACIN1 9606 - 14:23058564-23095614 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262710 ACIN1-003 23058567-23095614 protein_coding
  ENST00000338631 ACIN1-002 23058567-23071561 protein_coding
  ENST00000357481 ACIN1-001 23058567-23071617 protein_coding
  ENST00000397341 ACIN1-004 23058580-23071565 protein_coding
  ENST00000457657 ACIN1-201 23058567-23095614 protein_coding
  ENST00000473758 ACIN1-005 23058567-23069525 nonsense_mediated_decay
  ENST00000553501 ACIN1-010 23069033-23071557 retained_intron
  ENST00000553721 ACIN1-011 23068363-23071555 processed_transcript
  ENST00000553790 ACIN1-020 23063040-23064419 retained_intron
  ENST00000554680 ACIN1-017 23062433-23064710 retained_intron
  ENST00000554708 ACIN1-008 23077797-23079593 retained_intron
  ENST00000554979 ACIN1-012 23069329-23071201 retained_intron
  ENST00000555053 ACIN1-006 23059059-23095383 protein_coding
  ENST00000555352 ACIN1-009 23068481-23078870 nonsense_mediated_decay
  ENST00000555395 ACIN1-021 23061572-23062770 retained_intron
  ENST00000555478 ACIN1-019 23061502-23064629 retained_intron
  ENST00000555566 ACIN1-014 23063454-23071538 protein_coding
  ENST00000555807 ACIN1-016 23063465-23066496 retained_intron
  ENST00000556052 ACIN1-018 23063432-23064704 retained_intron
  ENST00000557039 ACIN1-015 23063460-23066323 retained_intron
  ENST00000557432 ACIN1-013 23068391-23071550 processed_transcript
  ENST00000557515 ACIN1-007 23058564-23071565 protein_coding
  ENST00000605057 ACIN1-022 23058567-23095153 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000338631ENST00000457657ENST00000473758ENST00000555053ENST00000555478ENST00000605057
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000338631 11.191±0.00 22.083±0.00 7.937±0.00 15.775±0.00 19.862±0.00 N/A 24.722±0.00 7.075±0.00 7.644±0.00 20.844±0.00 26.246±10.05 11.756±0.00 32.784±0.00
ENST00000457657 N/A N/A N/A N/A N/A N/A N/A N/A 2.982±0.00 N/A 2.487±0.79 N/A N/A
ENST00000473758 N/A N/A N/A N/A N/A N/A N/A N/A 13.220±0.00 N/A 15.982±1.56 N/A 15.167±0.00
ENST00000555053 N/A N/A N/A 3.723±0.00 N/A 0.792±0.00 N/A N/A N/A 7.195±0.00 1.948±0.00 N/A N/A
ENST00000555478 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.836±0.00 N/A N/A N/A
ENST00000605057 7.482±0.00 14.288±0.00 3.933±2.22 9.602±0.00 7.930±3.89 6.764±5.84 7.869±5.16 3.393±1.16 7.442±0.00 9.741±7.96 12.015±4.87 13.178±3.76 24.046±2.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MN CIL_0006MN_0001 CGP 14:23058564-23100462

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA:NAS nucleic acid binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005886 IDA plasma membrane
GO:0006200 NAS ATP catabolic process
GO:0006397 IEA mRNA processing
GO:0006915 TAS apoptotic process
GO:0006921 TAS cellular component disassembly involved in execution phase of apoptosis
GO:0008380 IEA RNA splicing
GO:0016607 IDA nuclear speck
GO:0016887 NAS ATPase activity
GO:0019899 NAS enzyme binding
GO:0030218 IEP erythrocyte differentiation
GO:0030263 IDA apoptotic chromosome condensation
GO:0035145 IDA exon-exon junction complex
GO:0043065 IDA positive regulation of apoptotic process
GO:0044822 IDA poly(A) RNA binding
GO:0045657 IEP positive regulation of monocyte differentiation
GO:0048025 IDA negative regulation of mRNA splicing, via spliceosome
GO:0061574 IDA ASAP complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000026842 acin1b apoptotic chromatin condensation inducer 1b protein_coding Danio_rerio
ENSMUSG00000022185 Acin1 apoptotic chromatin condensation inducer 1 protein_coding Mus_musculus

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