C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: apoptotic chromatin condensation inducer 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022185 Acin1 10090 - 14:54642161-54686931 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000022793 Acin1-001 54642161-54686931 protein_coding
  ENSMUST00000022794 Acin1-008 54642161-54653695 protein_coding
  ENSMUST00000111484 Acin1-003 54642728-54686931 protein_coding
  ENSMUST00000123875 Acin1-007 54645739-54653685 protein_coding
  ENSMUST00000124271 Acin1-019 54644727-54648578 retained_intron
  ENSMUST00000125265 Acin1-013 54665126-54686060 protein_coding
  ENSMUST00000125767 Acin1-018 54645303-54648342 retained_intron
  ENSMUST00000126166 Acin1-010 54642161-54653616 protein_coding
  ENSMUST00000129700 Acin1-024 54651400-54663706 retained_intron
  ENSMUST00000132242 Acin1-012 54679114-54686615 retained_intron
  ENSMUST00000133706 Acin1-020 54644997-54646047 retained_intron
  ENSMUST00000134808 Acin1-011 54675632-54686633 processed_transcript
  ENSMUST00000136909 Acin1-016 54650785-54653681 processed_transcript
  ENSMUST00000137763 Acin1-015 54650838-54653681 processed_transcript
  ENSMUST00000138321 Acin1-023 54643288-54644210 protein_coding
  ENSMUST00000141453 Acin1-004 54642161-54653667 protein_coding
  ENSMUST00000141993 Acin1-014 54661808-54664677 retained_intron
  ENSMUST00000147714 Acin1-002 54642162-54686616 protein_coding
  ENSMUST00000148754 Acin1-201 54642162-54653701 protein_coding
  ENSMUST00000149713 Acin1-017 54651515-54653691 retained_intron
  ENSMUST00000150371 Acin1-006 54642167-54653682 protein_coding
  ENSMUST00000151487 Acin1-021 54644255-54645866 retained_intron
  ENSMUST00000152773 Acin1-022 54642902-54644536 retained_intron
  ENSMUST00000167015 Acin1-009 54642728-54653239 protein_coding
  ENSMUST00000167495 Acin1-025 54645211-54650268 processed_transcript
  ENSMUST00000170299 Acin1-026 54646556-54649907 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022793ENSMUST00000111484ENSMUST00000125265ENSMUST00000126166ENSMUST00000141993ENSMUST00000147714ENSMUST00000148754ENSMUST00000152773ENSMUST00000167015ENSMUST00000167495
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022793 N/A 4.658±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000111484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.873±0.32 N/A N/A N/A
ENSMUST00000125265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 79.509±0.00 N/A 205.780±0.00
ENSMUST00000126166 N/A N/A 19.469±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.409±0.00 N/A
ENSMUST00000141993 N/A 28.050±4.23 N/A N/A N/A 21.720±1.22 N/A N/A N/A 23.671±0.00 N/A N/A N/A N/A
ENSMUST00000147714 10.364±2.45 5.857±0.93 19.518±5.27 22.774±10.30 13.851±2.06 7.711±2.48 4.678±0.92 9.285±2.55 13.061±9.29 7.645±1.75 6.057±1.14 29.368±19.33 14.392±4.69 14.215±4.17
ENSMUST00000148754 14.697±4.29 N/A 19.044±0.00 N/A N/A 8.850±2.30 5.457±0.00 10.237±1.05 8.637±5.65 12.559±0.84 N/A 19.224±4.04 27.127±11.44 10.827±0.00
ENSMUST00000152773 N/A N/A N/A 56.087±0.00 N/A N/A N/A N/A N/A N/A N/A 152.134±0.00 74.572±20.23 79.195±0.00
ENSMUST00000167015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.216±0.00 N/A
ENSMUST00000167495 N/A N/A N/A N/A 16.719±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090C CIL_00090C_0002 VISTA 14:54638004-55241428
CIL_0006MN CIL_0006MN_0002 CGP 14:54642161-54690742

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0005730 IDA nucleolus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006397 IEA mRNA processing
GO:0006915 ISS apoptotic process
GO:0008380 IEA RNA splicing
GO:0016607 ISS nuclear speck
GO:0030218 ISS erythrocyte differentiation
GO:0030263 ISS apoptotic chromosome condensation
GO:0035145 IEA exon-exon junction complex
GO:0043065 ISS positive regulation of apoptotic process
GO:0044822 IEA poly(A) RNA binding
GO:0045657 ISS positive regulation of monocyte differentiation
GO:0048025 ISS negative regulation of mRNA splicing, via spliceosome
GO:0061574 ISS ASAP complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000026842 acin1b apoptotic chromatin condensation inducer 1b protein_coding Danio_rerio
ENSG00000100813 ACIN1 apoptotic chromatin condensation inducer 1 protein_coding Homo_sapiens

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