C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: apoptotic chromatin condensation inducer 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000338631 ACIN1-002 ENSG00000100813 9606 - 14:23058567-23071561 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000338631
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000338631 11.191±0.00 22.083±0.00 7.937±0.00 15.775±0.00 19.862±0.00 24.722±0.00 7.075±0.00 7.644±0.00 20.844±0.00 26.246±10.05 11.756±0.00 32.784±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MN CIL_0006MN_0001 CGP 14:23058564-23100462

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 NAS nucleic acid binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005886 IDA plasma membrane
GO:0006200 NAS ATP catabolic process
GO:0006397 IEA mRNA processing
GO:0006915 TAS apoptotic process
GO:0006921 TAS cellular component disassembly involved in execution phase of apoptosis
GO:0008380 IEA RNA splicing
GO:0016607 IDA nuclear speck
GO:0016887 NAS ATPase activity
GO:0019899 NAS enzyme binding
GO:0030218 IEP erythrocyte differentiation
GO:0030263 IDA apoptotic chromosome condensation
GO:0035145 IDA exon-exon junction complex
GO:0043065 IDA positive regulation of apoptotic process
GO:0044822 IDA poly(A) RNA binding
GO:0045657 IEP positive regulation of monocyte differentiation
GO:0048025 IDA negative regulation of mRNA splicing, via spliceosome
GO:0061574 IDA ASAP complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000126166 Acin1-010 protein_coding Mus_musculus 0 2394
ENSMUST00000148754 Acin1-201 protein_coding Mus_musculus 0 2294
ENSMUST00000150371 Acin1-006 protein_coding Mus_musculus 0 2294
ENSMUST00000022793 Acin1-001 protein_coding Mus_musculus 0 2294
ENSMUST00000022794 Acin1-008 protein_coding Mus_musculus 0 2274
ENSMUST00000111484 Acin1-003 protein_coding Mus_musculus 0 2198
ENSMUST00000167015 Acin1-009 protein_coding Mus_musculus 0 2198
ENSMUST00000147714 Acin1-002 protein_coding Mus_musculus 0 1814
ENSMUST00000141453 Acin1-004 protein_coding Mus_musculus 0 1814
ENSMUST00000124271 Acin1-019 retained_intron Mus_musculus 0 883
ENSMUST00000167495 Acin1-025 processed_transcript Mus_musculus 0 824
ENSMUST00000152773 Acin1-022 retained_intron Mus_musculus 0 689
ENSMUST00000151487 Acin1-021 retained_intron Mus_musculus 0 664
ENSMUST00000138321 Acin1-023 protein_coding Mus_musculus 0 464
ENSMUST00000123875 Acin1-007 protein_coding Mus_musculus 0 418
ENSMUST00000125767 Acin1-018 retained_intron Mus_musculus 0 390
ENSMUST00000137763 Acin1-015 processed_transcript Mus_musculus 0 361
ENSMUST00000170299 Acin1-026 processed_transcript Mus_musculus 0 318
ENSMUST00000136909 Acin1-016 processed_transcript Mus_musculus 4.2039e-45 187
ENSMUST00000133706 Acin1-020 retained_intron Mus_musculus 0 331

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