C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000101935 AMMECR1 9606 - X:110194186-110440233 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262844 AMMECR1-001 110194186-110318239 protein_coding
  ENST00000372057 AMMECR1-002 110196410-110440233 protein_coding
  ENST00000372059 AMMECR1-005 110196372-110318084 protein_coding
  ENST00000473662 AMMECR1-003 110219480-110317771 processed_transcript
  ENST00000496695 AMMECR1-004 110309150-110317756 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262844ENST00000372059
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262844 0.646±0.00 0.823±0.00 0.459±0.00 0.125±0.00 0.638±0.53 0.368±0.00 0.276±0.14 0.638±0.13 0.331±0.06 0.869±0.62 N/A 1.737±0.42 2.475±0.64 0.418±0.00
ENST00000372059 N/A N/A 0.368±0.00 N/A 0.471±0.00 0.676±0.00 0.203±0.00 1.168±0.00 N/A N/A 0.557±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079Y CIL_00079Y_0001 CGP X:110002631-110440233
CIL_00079X CIL_00079X_0001 CGP X:110194186-110456334

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012892 ammecr1 Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 homolog (human) protein_coding Danio_rerio
ENSMUSG00000042225 Ammecr1 Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 protein_coding Mus_musculus

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