C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: suppressor of variegation 3-9 homolog 1 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000101945 SUV39H1 9606 + X:48695554-48709012 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000337852 SUV39H1-201 48695554-48709010 protein_coding
  ENST00000376687 SUV39H1-001 48696595-48709012 protein_coding
  ENST00000462786 SUV39H1-003 48706303-48707857 retained_intron
  ENST00000482260 SUV39H1-002 48705261-48707844 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000376687ENST00000482260
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000376687 2.019±0.00 1.019±0.00 0.116±0.00 1.192±0.58 1.508±1.22 1.016±0.02 0.350±0.00 1.662±0.23 0.436±0.17 0.430±0.23 1.130±0.72 1.698±1.10 1.673±0.41 0.612±0.00
ENST00000482260 N/A N/A N/A N/A N/A 1.375±0.00 N/A 1.740±0.00 N/A 0.168±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000183 IDA chromatin silencing at rDNA
GO:0000775 IEA chromosome, centromeric region
GO:0000792 IDA heterochromatin
GO:0000794 TAS condensed nuclear chromosome
GO:0000976 ISS transcription regulatory region sequence-specific DNA binding
GO:0003682 TAS chromatin binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA:IEA nucleus
GO:0005677 IDA chromatin silencing complex
GO:0006325 TAS chromatin organization
GO:0006351 IEA transcription, DNA-templated
GO:0006364 IEA rRNA processing
GO:0007049 IEA cell cycle
GO:0008270 IEA zinc ion binding
GO:0008757 IDA S-adenosylmethionine-dependent methyltransferase activity
GO:0016032 IEA viral process
GO:0018024 IDA:IEA histone-lysine N-methyltransferase activity
GO:0030154 IEA cell differentiation
GO:0033553 IDA rDNA heterochromatin
GO:0034968 IEA histone lysine methylation
GO:0036123 ISS histone H3-K9 dimethylation
GO:0036124 ISS histone H3-K9 trimethylation
GO:0042054 IDA histone methyltransferase activity
GO:0042754 ISS negative regulation of circadian rhythm
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0046974 IDA histone methyltransferase activity (H3-K9 specific)
GO:0047485 IPI protein N-terminus binding
GO:0048511 IEA rhythmic process
GO:0051567 IEA histone H3-K9 methylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000026799 suv39h1a suppressor of variegation 3-9 homolog 1a protein_coding Danio_rerio
ENSDARG00000055753 suv39h1b suppressor of variegation 3-9 homolog 1b protein_coding Danio_rerio
ENSMUSG00000039231 Suv39h1 suppressor of variegation 3-9 homolog 1 (Drosophila) protein_coding Mus_musculus

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