C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: suppressor of variegation 3-9 homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000376687 SUV39H1-001 ENSG00000101945 9606 + X:48696595-48709012 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000376687
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000376687 2.019±0.00 1.019±0.00 0.116±0.00 1.192±0.58 1.508±1.22 1.016±0.02 0.350±0.00 1.662±0.23 0.436±0.17 0.430±0.23 1.130±0.72 1.698±1.10 1.673±0.41 0.612±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000183 IDA chromatin silencing at rDNA
GO:0000775 IEA chromosome, centromeric region
GO:0000792 IDA heterochromatin
GO:0000794 TAS condensed nuclear chromosome
GO:0000976 ISS transcription regulatory region sequence-specific DNA binding
GO:0003682 TAS chromatin binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA:IEA nucleus
GO:0005677 IDA chromatin silencing complex
GO:0006325 TAS chromatin organization
GO:0006351 IEA transcription, DNA-templated
GO:0006364 IEA rRNA processing
GO:0007049 IEA cell cycle
GO:0008270 IEA zinc ion binding
GO:0008757 IDA S-adenosylmethionine-dependent methyltransferase activity
GO:0016032 IEA viral process
GO:0018024 IDA:IEA histone-lysine N-methyltransferase activity
GO:0030154 IEA cell differentiation
GO:0033553 IDA rDNA heterochromatin
GO:0034968 IEA histone lysine methylation
GO:0036123 ISS histone H3-K9 dimethylation
GO:0036124 ISS histone H3-K9 trimethylation
GO:0042054 IDA histone methyltransferase activity
GO:0042754 ISS negative regulation of circadian rhythm
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0046974 IDA histone methyltransferase activity (H3-K9 specific)
GO:0047485 IPI protein N-terminus binding
GO:0048511 IEA rhythmic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115638 Suv39h1-001 protein_coding Mus_musculus 0 1742
ENSMUST00000115637 Suv39h1-002 protein_coding Mus_musculus 0 1557
ENSMUST00000150095 Suv39h1-005 retained_intron Mus_musculus 0 1179
ENSMUST00000115636 Suv39h1-004 protein_coding Mus_musculus 0 1046
ENSMUST00000127617 Suv39h1-003 retained_intron Mus_musculus 0 861

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