C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NEDD4 binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000102921 N4BP1 9606 - 16:48538726-48620148 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262384 N4BP1-001 48538726-48610209 protein_coding
  ENST00000564124 N4BP1-002 48546097-48620148 retained_intron
  ENST00000564710 N4BP1-006 48561958-48603712 protein_coding
  ENST00000565423 N4BP1-005 48542880-48551444 processed_transcript
  ENST00000565638 N4BP1-004 48546182-48553653 processed_transcript
  ENST00000569027 N4BP1-003 48543164-48546584 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262384ENST00000564124ENST00000564710
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262384 3.455±0.00 4.716±0.00 0.688±0.00 1.517±0.70 3.082±1.55 2.456±0.68 1.552±1.20 3.939±0.00 1.323±0.21 4.986±0.00 1.769±1.29 3.192±2.95 2.609±1.89 4.072±0.54
ENST00000564124 N/A N/A N/A N/A 4.499±0.00 1.204±0.29 N/A N/A N/A N/A N/A N/A N/A 0.982±0.00
ENST00000564710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.728±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VO CIL_0002VO_0001 CGP 16:48538726-49281831

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005730 ISS nucleolus
GO:0016605 ISS PML body
GO:0031397 ISS negative regulation of protein ubiquitination
GO:0032435 ISS negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0034644 IMP cellular response to UV

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057491 n4bp1 nedd4 binding protein 1 protein_coding Danio_rerio
ENSMUSG00000031652 N4bp1 NEDD4 binding protein 1 protein_coding Mus_musculus

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