C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NEDD4 binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000262384 N4BP1-001 ENSG00000102921 9606 - 16:48538726-48610209 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262384
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262384 3.455±0.00 4.716±0.00 0.688±0.00 1.517±0.70 3.082±1.55 2.456±0.68 1.552±1.20 3.939±0.00 1.323±0.21 4.986±0.00 1.769±1.29 3.192±2.95 2.609±1.89 4.072±0.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VO CIL_0002VO_0001 CGP 16:48538726-49281831

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005730 ISS nucleolus
GO:0016605 ISS PML body
GO:0031397 ISS negative regulation of protein ubiquitination
GO:0032435 ISS negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0034644 IMP cellular response to UV

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034074 N4bp1-201 protein_coding Mus_musculus 0 2597
ENSMUST00000120391 Gm13506-001 unprocessed_pseudogene Mus_musculus 0 586

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