C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002VO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000102921-ENSG00000102924 CGP 9606 16:48538726-49281831
GeneTranscriptPositionBiotype
ENSG00000102921 (N4BP1)
NEDD4 binding protein 1 		ENST00000262384 (N4BP1-001) 48538726-48610209 protein_coding
ENST00000564124 (N4BP1-002) 48546097-48620148 retained_intron
ENST00000564710 (N4BP1-006) 48561958-48603712 protein_coding
ENST00000565423 (N4BP1-005) 48542880-48551444 processed_transcript
ENST00000565638 (N4BP1-004) 48546182-48553653 processed_transcript
ENST00000569027 (N4BP1-003) 48543164-48546584 retained_intron
ENSG00000102924 (CBLN1)
cerebellin 1 precursor 		ENST00000219197 (CBLN1-001) 49277917-49281831 protein_coding
ENST00000536749 (CBLN1-201) 49279312-49281562 protein_coding
ENST00000564786 (CBLN1-002) 49279290-49281482 nonsense_mediated_decay
ENSG00000243609 (RPS2P44)
ribosomal protein S2 pseudogene 44 		ENST00000478038 (RPS2P44-001) 48577524-48578369 processed_pseudogene
ENSG00000259912 (CTC-527H23.2)
 ENST00000565055 (CTC-527H23.2-001) 48620319-48622033 lincRNA
ENSG00000260033 (CTC-527H23.1)
 ENST00000564321 (CTC-527H23.1-001) 48600176-48600644 processed_pseudogene
ENSG00000260052 (CTC-527H23.3)
 ENST00000561876 (CTC-527H23.3-001) 48637143-48638719 lincRNA
ENSG00000260086 (RP11-42I10.1)
 ENST00000564212 (RP11-42I10.1-002) 48623447-48673478 lincRNA
ENST00000565072 (RP11-42I10.1-003) 48623462-48676752 lincRNA
ENST00000568150 (RP11-42I10.1-001) 48623436-48744921 lincRNA
ENSG00000260726 (KLF8P1)
Kruppel-like factor 8 pseudogene 1 		ENST00000566880 (KLF8P1-001) 48718083-48719143 processed_pseudogene
ENSG00000261267 (RP11-44I10.3)
 ENST00000563994 (RP11-44I10.3-001) 48559661-48587403 antisense
ENSG00000261815 (RP11-22D3.2)
 ENST00000564222 (RP11-22D3.2-001) 49170552-49171786 lincRNA
CIL_0002VO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031652-ENSMUSG00000031654 CGP 10090 8:86841139-87472592
GeneTranscriptPositionBiotype
ENSMUSG00000031652 (N4bp1)
NEDD4 binding protein 1 		ENSMUST00000034074 (N4bp1-201) 86841139-86885258 protein_coding
ENSMUSG00000031654 (Cbln1)
cerebellin 1 precursor protein 		ENSMUST00000034076 (Cbln1-201) 87468854-87472592 protein_coding
ENSMUST00000169693 (Cbln1-202) 87469238-87472386 protein_coding
ENSMUSG00000066362 (Rps13-ps1)
ribosomal protein S13, pseudogene 1 		ENSMUST00000183478 (Rps13-ps1-001) 87047689-87048226 processed_pseudogene
ENSMUSG00000098257 (Gm27169)
predicted gene 27169 		ENSMUST00000183344 (Gm27169-001) 87203026-87293504 lincRNA
ENSMUSG00000098295 (Gm19872)
predicted gene, 19872 		ENSMUST00000183446 (Gm19872-001) 87460469-87463797 lincRNA
ENSMUSG00000098360 (4930535O05Rik)
RIKEN cDNA 4930535O05 gene 		ENSMUST00000184406 (4930535O05Rik-001) 87458444-87459435 lincRNA
ENSMUSG00000098391 (Gm27208)
predicted gene 27208 		ENSMUST00000184323 (Gm27208-001) 87381059-87386929 lincRNA
ENSMUSG00000098434 (2010110E17Rik)
RIKEN cDNA 2010110E17 gene 		ENSMUST00000184161 (2010110E17Rik-001) 86885688-86886566 lincRNA
ENSMUSG00000098534 (Gm27167)
predicted gene 27167 		ENSMUST00000183752 (Gm27167-001) 86902453-86919422 lincRNA
ENSMUSG00000098684 (Gm27246)
predicted gene 27246 		ENSMUST00000183611 (Gm27246-001) 87114645-87198404 lincRNA
ENSMUSG00000098768 (Gm27207)
predicted gene 27207 		ENSMUST00000184995 (Gm27207-001) 87354501-87373075 lincRNA
ENSMUSG00000098854 (Gm5118)
predicted gene 5118 		ENSMUST00000184692 (Gm5118-001) 87093307-87100987 lincRNA
ENSMUSG00000099162 (Gm27168)
predicted gene 27168 		ENSMUST00000183394 (Gm27168-001) 86920477-86921147 lincRNA
ENSMUSG00000099207 (Gm10637)
predicted gene 10637 		ENSMUST00000183718 (Gm10637-002) 87169747-87199839 lincRNA
ENSMUST00000184702 (Gm10637-001) 87195088-87199850 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002VO_0001ENSG00000102921ENST00000262384ENST00000564124ENST00000564710ENST00000565423ENST00000565638ENST00000569027ENSG00000102924ENST00000219197ENST00000536749ENST00000564786ENSG00000243609ENST00000478038ENSG00000259912ENST00000565055ENSG00000260033ENST00000564321ENSG00000260052ENST00000561876ENSG00000260086ENST00000564212ENST00000565072ENST00000568150ENSG00000260726ENST00000566880ENSG00000261267ENST00000563994ENSG00000261815ENST00000564222CIL_0002VO_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002VO_0001ENSG00000102921ENST00000262384ENST00000564124ENST00000564710ENSG00000102924ENST00000219197ENST00000536749ENST00000564786ENSG00000243609ENST00000478038ENSG00000259912ENST00000565055ENSG00000260033ENST00000564321ENSG00000260052ENST00000561876ENSG00000260086ENST00000564212ENST00000565072ENST00000568150ENSG00000260726ENST00000566880ENSG00000261267ENST00000563994ENSG00000261815ENST00000564222CIL_0002VO_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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102921 ENST00000262384 3.455±0.00 4.716±0.00 0.688±0.00 1.517±0.70 3.082±1.55 2.456±0.68 1.552±1.20 3.939±0.00 1.323±0.21 4.986±0.00 1.769±1.29 3.192±2.95 2.609±1.89 4.072±0.54
ENST00000564124 N/A N/A N/A N/A 4.499±0.00 1.204±0.29 N/A N/A N/A N/A N/A N/A N/A 0.982±0.00
ENST00000564710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.728±0.00 N/A N/A N/A
ENST00000565423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000102924 ENST00000219197 1.559±0.00 N/A N/A N/A 0.647±0.60 0.243±0.00 0.306±0.00 N/A N/A 0.037±0.00 N/A 0.900±0.86 0.242±0.09 1.894±0.02
ENST00000536749 1.464±0.00 0.559±0.00 N/A 1.365±0.00 N/A 1.419±0.00 0.759±0.32 N/A N/A N/A N/A 0.832±0.00 0.222±0.00 10.735±5.20
ENST00000564786 N/A N/A N/A N/A N/A 1.404±0.00 N/A N/A 0.231±0.00 N/A N/A N/A N/A N/A
ENSG00000243609 ENST00000478038 0.022±0.00 0.189±0.00 N/A 0.027±0.00 0.286±0.00 0.065±0.04 0.029±0.01 0.097±0.00 N/A 0.195±0.17 0.061±0.00 0.121±0.06 0.056±0.00 0.182±0.00
ENSG00000259912 ENST00000565055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.786±0.31
ENSG00000260033 ENST00000564321 N/A 0.024±0.00 N/A 0.045±0.00 0.217±0.20 0.821±0.00 0.204±0.05 0.081±0.01 0.055±0.03 0.556±0.00 N/A 0.170±0.14 N/A 0.024±0.00
ENSG00000260052 ENST00000561876 N/A 0.032±0.00 N/A N/A 0.068±0.00 0.093±0.00 0.029±0.00 0.099±0.00 0.306±0.00 N/A N/A 0.117±0.07 0.091±0.02 0.077±0.05
ENSG00000260086 ENST00000564212 0.014±0.00 N/A N/A N/A N/A 0.317±0.00 N/A N/A N/A N/A N/A 0.024±0.01 N/A 0.033±0.00
ENST00000565072 0.169±0.00 0.429±0.00 N/A 0.060±0.00 0.137±0.00 0.269±0.00 N/A 0.497±0.00 0.045±0.00 N/A 0.022±0.00 0.093±0.03 0.333±0.03 0.055±0.00
ENST00000568150 0.019±0.00 0.043±0.00 N/A 0.161±0.00 N/A 0.128±0.03 0.110±0.00 0.163±0.00 0.041±0.02 0.117±0.00 N/A 0.083±0.03 0.170±0.07 0.094±0.01
ENSG00000260726 ENST00000566880 N/A N/A N/A 0.234±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000261267 ENST00000563994 0.153±0.00 0.098±0.00 N/A 1.188±0.00 0.066±0.00 1.519±0.00 0.931±0.00 0.293±0.00 N/A 5.125±0.00 1.259±0.00 N/A 0.126±0.00 0.316±0.06
ENSG00000261815 ENST00000564222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.107±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031652 ENSMUST00000034074 4.497±2.27 9.126±2.69 3.938±0.62 5.539±1.21 4.367±1.75 7.537±1.16 2.571±0.65 4.628±1.07 2.532±0.59 6.156±1.11 3.966±1.47 8.890±2.16 3.584±1.47 2.491±1.00
ENSMUSG00000031654 ENSMUST00000034076 0.014±0.00 0.622±0.22 0.012±0.00 6.785±4.01 N/A 0.169±0.06 0.267±0.11 0.109±0.04 0.066±0.01 N/A N/A 0.298±0.15 0.536±0.38 1.506±0.49
ENSMUST00000169693 0.039±0.02 N/A N/A 7.309±0.00 N/A 0.108±0.08 0.154±0.06 0.043±0.02 0.040±0.03 N/A 0.043±0.00 0.161±0.08 0.170±0.11 0.988±0.64
ENSMUSG00000066362 ENSMUST00000183478 6.907±1.84 14.656±1.65 1.012±0.28 1.192±0.85 5.455±1.09 16.215±12.04 11.598±2.67 17.363±8.15 14.943±14.96 3.574±1.85 0.157±0.07 9.489±9.07 0.760±0.43 11.197±1.99
ENSMUSG00000098257 ENSMUST00000183344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.042±0.00
ENSMUSG00000098295 ENSMUST00000183446 N/A N/A N/A 0.015±0.00 N/A N/A N/A 0.064±0.00 N/A 0.119±0.00 N/A N/A N/A 7.995±0.67
ENSMUSG00000098360 ENSMUST00000184406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.028±2.14
ENSMUSG00000098391 ENSMUST00000184323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.630±0.67
ENSMUSG00000098434 ENSMUST00000184161 0.109±0.06 N/A 0.040±0.00 0.016±0.01 N/A N/A N/A 0.052±0.00 0.019±0.01 N/A N/A 0.100±0.03 0.014±0.00 0.088±0.02
ENSMUSG00000098534 ENSMUST00000183752 N/A N/A 0.064±0.02 0.175±0.13 N/A 0.330±0.12 N/A N/A N/A N/A 0.110±0.00 0.262±0.13 0.158±0.14 0.242±0.10
ENSMUSG00000098684 ENSMUST00000183611 N/A N/A N/A N/A 0.118±0.00 N/A 0.031±0.01 N/A N/A N/A 0.037±0.00 0.117±0.01 0.030±0.02 0.187±0.00
ENSMUSG00000098768 ENSMUST00000184995 N/A N/A N/A 0.010±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000098854 ENSMUST00000184692 0.018±0.00 N/A N/A 0.007±0.00 N/A N/A N/A 0.015±0.00 N/A N/A 0.017±0.00 0.012±0.00 N/A 0.962±0.00
ENSMUSG00000099162 ENSMUST00000183394 N/A N/A 0.039±0.00 0.123±0.00 0.406±0.15 N/A 0.161±0.00 N/A N/A N/A N/A N/A 0.025±0.00 0.377±0.15
ENSMUSG00000099207 ENSMUST00000183718 N/A N/A N/A N/A 0.188±0.00 N/A N/A N/A N/A N/A 0.057±0.00 0.135±0.06 N/A N/A
ENSMUST00000184702 0.022±0.00 0.082±0.03 N/A 0.044±0.00 0.071±0.02 0.022±0.00 N/A N/A N/A N/A 0.008±0.00 0.130±0.09 0.013±0.01 0.109±0.02

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