C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 7 (amino acid transporter light chain, L system), member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000103257 SLC7A5 9606 - 16:87830023-87869488 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261622 SLC7A5-001 87830023-87869488 protein_coding
  ENST00000563489 SLC7A5-003 87832732-87836805 retained_intron
  ENST00000565644 SLC7A5-002 87830023-87863639 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261622ENST00000565644
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261622 2.122±0.00 3.461±0.00 0.525±0.00 6.056±3.58 0.894±0.17 0.864±0.74 0.493±0.44 1.172±0.92 0.827±0.00 2.986±0.00 1.417±0.05 7.140±4.85 10.694±5.26 10.107±0.14
ENST00000565644 N/A 4.830±0.00 N/A 12.749±0.00 0.742±0.00 N/A 0.746±0.00 5.383±0.00 N/A 0.548±0.12 8.302±0.00 5.681±2.40 9.364±7.26 10.950±5.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002T0 CIL_0002T0_0001 CGP 16:87696485-87869488
CIL_0002SX CIL_0002SX_0001 CGP 16:87830023-87936529

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003333 IEA amino acid transmembrane transport
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IEA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006520 TAS cellular amino acid metabolic process
GO:0006810 TAS:IEA transport
GO:0006811 TAS ion transport
GO:0006865 TAS:IEA amino acid transport
GO:0007399 IEA nervous system development
GO:0007596 TAS blood coagulation
GO:0015171 ISS:IEA amino acid transmembrane transporter activity
GO:0015175 TAS neutral amino acid transmembrane transporter activity
GO:0015179 IEA L-amino acid transmembrane transporter activity
GO:0015804 ISS neutral amino acid transport
GO:0015807 IEA L-amino acid transport
GO:0016020 IDA:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030154 IEA cell differentiation
GO:0042605 ISS peptide antigen binding
GO:0050900 TAS leukocyte migration
GO:0055085 TAS:IEA transmembrane transport
GO:0070062 IDA extracellular vesicular exosome
GO:1902475 IEA L-alpha-amino acid transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000051887 SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 protein_coding Danio_rerio
ENSMUSG00000040010 Slc7a5 solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 protein_coding Mus_musculus

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