C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 7 (amino acid transporter light chain, L system), member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000565644 SLC7A5-002 ENSG00000103257 9606 - 16:87830023-87863639 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartKidneyLungMuscleOvaryPlacentaTestisENST00000565644
Transcript ID Adrenal Brain Breast Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000565644 4.830±0.00 12.749±0.00 0.742±0.00 0.746±0.00 5.383±0.00 0.548±0.12 8.302±0.00 5.681±2.40 9.364±7.26 10.950±5.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002T0 CIL_0002T0_0001 CGP 16:87696485-87869488
CIL_0002SX CIL_0002SX_0001 CGP 16:87830023-87936529

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IEA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006520 TAS cellular amino acid metabolic process
GO:0006810 TAS:IEA transport
GO:0006811 TAS ion transport
GO:0006865 TAS amino acid transport
GO:0007399 IEA nervous system development
GO:0007596 TAS blood coagulation
GO:0015171 ISS amino acid transmembrane transporter activity
GO:0015175 TAS neutral amino acid transmembrane transporter activity
GO:0015804 ISS neutral amino acid transport
GO:0016020 IDA:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030154 IEA cell differentiation
GO:0042605 ISS peptide antigen binding
GO:0050900 TAS leukocyte migration
GO:0055085 TAS:IEA transmembrane transport
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000045557 Slc7a5-001 protein_coding Mus_musculus 0 992
ENSDART00000073595 SLC7A5-201 protein_coding Danio_rerio 0 505

Loading