C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transcription elongation factor B (SIII), polypeptide 2 (18kDa, elongin B)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000103363 TCEB2 9606 - 16:2771414-2777297 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262306 TCEB2-002 2771414-2777277 protein_coding
  ENST00000409477 TCEB2-003 2771415-2777195 protein_coding
  ENST00000409906 TCEB2-001 2771414-2777297 protein_coding
  ENST00000494946 TCEB2-004 2771941-2777127 protein_coding
  ENST00000572954 TCEB2-005 2771943-2777272 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverOvaryPlacentaTestisENST00000262306ENST00000494946
Transcript ID Liver Ovary Placenta Testis
ENST00000262306 155.364±0.00 1075.460±0.00 156.870±16.18 366.455±0.00
ENST00000494946 N/A N/A 210.691±9.48 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000JU CIL_0000JU_0001 CGP 16:2752329-2777297
CIL_0000JV CIL_0000JV_0001 CGP 16:2771414-2787948

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003746 IEA translation elongation factor activity
GO:0005515 IPI:IEA protein binding
GO:0005654 TAS nucleoplasm
GO:0005829 TAS cytosol
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006368 TAS transcription elongation from RNA polymerase II promoter
GO:0006414 IEA translational elongation
GO:0006461 TAS protein complex assembly
GO:0010467 TAS gene expression
GO:0016032 TAS viral process
GO:0016567 IEA protein ubiquitination
GO:0031462 IDA Cul2-RING ubiquitin ligase complex
GO:0031466 IDA Cul5-RING ubiquitin ligase complex
GO:0031625 IDA ubiquitin protein ligase binding
GO:0050434 TAS positive regulation of viral transcription
GO:0061418 TAS regulation of transcription from RNA polymerase II promoter in response to hypoxia
GO:0070062 IDA extracellular vesicular exosome
GO:0070449 IEA elongin complex
GO:0071456 TAS cellular response to hypoxia

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037980 tceb2 transcription elongation factor B (SIII), polypeptide 2 (18kD, elongin B) protein_coding Danio_rerio
ENSDARG00000097471 TCEB2 (2 of 2) transcription elongation factor B (SIII), polypeptide 2 (18kDa, elongin B) protein_coding Danio_rerio
ENSMUSG00000055839 Tceb2 transcription elongation factor B (SIII), polypeptide 2 protein_coding Mus_musculus

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