C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0000JU_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000167978-ENSG00000103363 | CGP | 9606 | 16:2752329-2777297  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000103363  (TCEB2)transcription elongation factor B (SIII), polypeptide 2 (18kDa, elongin B) |
ENST00000262306 (TCEB2-002)
|
2771414-2777277 | protein_coding | |
|
ENST00000409477 (TCEB2-003)
|
2771415-2777195 | protein_coding | ||
|
ENST00000409906 (TCEB2-001)
|
2771414-2777297 | protein_coding | ||
|
ENST00000494946 (TCEB2-004)
|
2771941-2777127 | protein_coding | ||
|
ENST00000572954 (TCEB2-005)
|
2771943-2777272 | protein_coding | ||
|
ENSG00000167978 (SRRM2) serine/arginine repetitive matrix 2 |
ENST00000301740 (SRRM2-001)
|
2752329-2771412 | protein_coding | |
|
ENST00000570539 (SRRM2-032)
|
2770911-2771412 | protein_coding | ||
|
ENST00000570655 (SRRM2-015)
|
2758924-2759843 | retained_intron | ||
|
ENST00000570705 (SRRM2-025)
|
2768551-2769454 | retained_intron | ||
|
ENST00000570971 (SRRM2-013)
|
2757476-2760845 | protein_coding | ||
|
ENST00000571041 (SRRM2-024)
|
2768528-2769422 | retained_intron | ||
|
ENST00000571372 (SRRM2-030)
|
2758908-2759548 | retained_intron | ||
|
ENST00000571378 (SRRM2-007)
|
2752716-2763501 | protein_coding | ||
|
ENST00000572278 (SRRM2-017)
|
2759747-2761810 | processed_transcript | ||
|
ENST00000572721 (SRRM2-021)
|
2767856-2768939 | processed_transcript | ||
|
ENST00000572883 (SRRM2-020)
|
2767722-2769248 | nonsense_mediated_decay | ||
|
ENST00000572952 (SRRM2-018)
|
2760033-2762211 | retained_intron | ||
|
ENST00000573311 (SRRM2-023)
|
2768081-2769547 | retained_intron | ||
|
ENST00000573451 (SRRM2-014)
|
2758854-2759731 | retained_intron | ||
|
ENST00000573498 (SRRM2-016)
|
2758948-2761807 | retained_intron | ||
|
ENST00000573583 (SRRM2-033)
|
2771278-2772538 | processed_transcript | ||
|
ENST00000573692 (SRRM2-031)
|
2770355-2771410 | nonsense_mediated_decay | ||
|
ENST00000574331 (SRRM2-010)
|
2769374-2771410 | retained_intron | ||
|
ENST00000574340 (SRRM2-012)
|
2753443-2757574 | protein_coding | ||
|
ENST00000574593 (SRRM2-022)
|
2767507-2770258 | processed_transcript | ||
|
ENST00000574866 (SRRM2-027)
|
2769895-2770934 | processed_transcript | ||
|
ENST00000575009 (SRRM2-006)
|
2752638-2761707 | protein_coding | ||
|
ENST00000575701 (SRRM2-011)
|
2752662-2757873 | retained_intron | ||
|
ENST00000575870 (SRRM2-029)
|
2757832-2760010 | processed_transcript | ||
|
ENST00000576076 (SRRM2-009)
|
2759933-2760846 | retained_intron | ||
|
ENST00000576415 (SRRM2-028)
|
2752714-2758524 | protein_coding | ||
|
ENST00000576674 (SRRM2-019)
|
2763867-2765368 | processed_transcript | ||
|
ENST00000576878 (SRRM2-026)
|
2768746-2770229 | retained_intron | ||
|
ENST00000576894 (SRRM2-004)
|
2752662-2760621 | retained_intron | ||
|
ENST00000576924 (SRRM2-003)
|
2752626-2763582 | protein_coding | ||
| CIL_0000JU_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000039218-ENSMUSG00000055839 | CGP | 10090 | 17:23790662-23829109 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000039218 (Srrm2) serine/arginine repetitive matrix 2 |
ENSMUST00000088621 (Srrm2-001)
|
23803221-23824741 | protein_coding | |
|
ENSMUST00000186045 (Srrm2-008)
|
23811672-23812600 | nonsense_mediated_decay | ||
|
ENSMUST00000186259 (Srrm2-009)
|
23821387-23822660 | nonsense_mediated_decay | ||
|
ENSMUST00000186914 (Srrm2-004)
|
23819308-23822528 | processed_transcript | ||
|
ENSMUST00000186961 (Srrm2-012)
|
23790662-23808518 | protein_coding | ||
|
ENSMUST00000189977 (Srrm2-003)
|
23811900-23816492 | retained_intron | ||
|
ENSMUST00000190293 (Srrm2-007)
|
23808098-23808708 | retained_intron | ||
|
ENSMUST00000190568 (Srrm2-010)
|
23823525-23824327 | retained_intron | ||
|
ENSMUST00000190686 (Srrm2-002)
|
23803187-23824736 | protein_coding | ||
|
ENSMUST00000191385 (Srrm2-006)
|
23807918-23810006 | protein_coding | ||
|
ENSMUSG00000055839 (Tceb2) transcription elongation factor B (SIII), polypeptide 2 |
ENSMUST00000069579 (Tceb2-201)
|
23824740-23829109 | protein_coding | |
|
ENSMUSG00000092981 (Mir5125) microRNA 5125 |
ENSMUST00000175240 (Mir5125-201)
|
23823291-23823369 | miRNA | |
Expression Patterns
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