C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: branched chain ketoacid dehydrogenase kinase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000103507 BCKDK 9606 + 16:31106107-31112791 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000219794 BCKDK-001 31108294-31112791 protein_coding
  ENST00000287507 BCKDK-003 31108294-31112567 protein_coding
  ENST00000394950 BCKDK-002 31108294-31112567 protein_coding
  ENST00000394951 BCKDK-004 31106107-31112567 protein_coding
  ENST00000484226 BCKDK-010 31109120-31110722 protein_coding
  ENST00000561755 BCKDK-007 31108484-31109403 protein_coding
  ENST00000566568 BCKDK-005 31108449-31112566 retained_intron
  ENST00000567530 BCKDK-006 31108294-31112533 nonsense_mediated_decay
  ENST00000567676 BCKDK-008 31108934-31109579 protein_coding
  ENST00000567682 BCKDK-009 31111368-31112454 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000219794ENST00000287507ENST00000394950ENST00000484226ENST00000566568ENST00000567530ENST00000567682
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000219794 N/A N/A 2.082±0.00 1.516±0.00 N/A 0.596±0.00 1.735±0.00 N/A N/A N/A N/A 4.440±0.00 5.926±1.07 1.099±0.00
ENST00000287507 5.652±0.00 N/A N/A N/A 5.285±0.00 1.756±1.13 N/A N/A N/A N/A N/A N/A N/A 4.150±0.00
ENST00000394950 4.467±0.00 11.150±0.00 N/A 4.660±1.42 4.259±0.00 1.679±0.96 12.320±11.49 12.910±1.42 5.755±3.69 4.349±0.00 8.629±0.44 10.126±6.07 7.754±2.18 4.117±0.21
ENST00000484226 N/A N/A 1.415±0.00 N/A N/A 3.299±0.00 N/A N/A 3.509±0.00 N/A N/A 7.489±0.00 9.305±0.00 3.421±0.00
ENST00000566568 N/A N/A N/A N/A 0.636±0.00 N/A N/A N/A N/A 0.369±0.00 N/A N/A N/A 0.641±0.00
ENST00000567530 7.847±0.00 7.823±0.00 1.300±0.00 5.038±0.00 4.306±1.86 6.002±0.00 7.098±6.46 N/A 5.950±0.00 7.131±0.00 7.787±5.43 6.281±3.00 7.432±1.83 6.113±0.00
ENST00000567682 22.174±0.00 25.180±0.00 N/A 8.247±0.00 25.546±0.00 13.920±0.00 N/A N/A N/A N/A 11.710±0.00 N/A N/A 19.626±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006UF CIL_0006UF_0001 CGP 16:31090842-31112791
CIL_00043A CIL_00043A_0001 CGP 16:31106107-31131393

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0004674 ISS protein serine/threonine kinase activity
GO:0005515 IPI protein binding
GO:0005524 ISS ATP binding
GO:0005739 IDA mitochondrion
GO:0005947 ISS mitochondrial alpha-ketoglutarate dehydrogenase complex
GO:0006468 IEA protein phosphorylation
GO:0009063 NAS cellular amino acid catabolic process
GO:0009083 ISS branched-chain amino acid catabolic process
GO:0016301 TAS kinase activity
GO:0016310 ISS phosphorylation
GO:0047323 IEA [3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring)] kinase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016904 bckdk branched chain alpha-ketoacid dehydrogenase kinase protein_coding Danio_rerio
ENSMUSG00000030802 Bckdk branched chain ketoacid dehydrogenase kinase protein_coding Mus_musculus

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