C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: branched chain ketoacid dehydrogenase kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394950 BCKDK-002 ENSG00000103507 9606 + 16:31108294-31112567 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000394950
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000394950 4.467±0.00 11.150±0.00 4.660±1.42 4.259±0.00 1.679±0.96 12.320±11.49 12.910±1.42 5.755±3.69 4.349±0.00 8.629±0.44 10.126±6.07 7.754±2.18 4.117±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006UF CIL_0006UF_0001 CGP 16:31090842-31112791
CIL_00043A CIL_00043A_0001 CGP 16:31106107-31131393

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004674 ISS protein serine/threonine kinase activity
GO:0005515 IPI protein binding
GO:0005524 ISS ATP binding
GO:0005739 IDA mitochondrion
GO:0005947 ISS mitochondrial alpha-ketoglutarate dehydrogenase complex
GO:0006468 IEA protein phosphorylation
GO:0009063 NAS cellular amino acid catabolic process
GO:0009083 ISS branched-chain amino acid catabolic process
GO:0016301 TAS kinase activity
GO:0016310 ISS phosphorylation
GO:0047323 IEA [3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring)] kinase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071056 Bckdk-001 protein_coding Mus_musculus 0 1299
ENSMUST00000124533 Bckdk-004 processed_transcript Mus_musculus 0 734
ENSMUST00000151451 Bckdk-003 protein_coding Mus_musculus 0 675
ENSMUST00000146574 Bckdk-002 retained_intron Mus_musculus 0 340

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