C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006UF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000167397-ENSG00000103507 CGP 9606 16:31090842-31112791
GeneTranscriptPositionBiotype
ENSG00000103507 (BCKDK)
branched chain ketoacid dehydrogenase kinase 		ENST00000219794 (BCKDK-001) 31108294-31112791 protein_coding
ENST00000287507 (BCKDK-003) 31108294-31112567 protein_coding
ENST00000394950 (BCKDK-002) 31108294-31112567 protein_coding
ENST00000394951 (BCKDK-004) 31106107-31112567 protein_coding
ENST00000484226 (BCKDK-010) 31109120-31110722 protein_coding
ENST00000561755 (BCKDK-007) 31108484-31109403 protein_coding
ENST00000566568 (BCKDK-005) 31108449-31112566 retained_intron
ENST00000567530 (BCKDK-006) 31108294-31112533 nonsense_mediated_decay
ENST00000567676 (BCKDK-008) 31108934-31109579 protein_coding
ENST00000567682 (BCKDK-009) 31111368-31112454 protein_coding
ENSG00000167397 (VKORC1)
vitamin K epoxide reductase complex, subunit 1 		ENST00000300851 (VKORC1-004) 31090842-31094760 protein_coding
ENST00000319788 (VKORC1-002) 31090842-31094940 protein_coding
ENST00000354895 (VKORC1-003) 31090842-31094956 protein_coding
ENST00000394971 (VKORC1-006) 31091104-31094549 protein_coding
ENST00000394975 (VKORC1-001) 31090842-31094957 protein_coding
ENST00000420057 (VKORC1-008) 31090842-31095633 protein_coding
ENST00000472468 (VKORC1-005) 31091182-31093611 protein_coding
ENST00000498155 (VKORC1-007) 31091175-31095980 protein_coding
ENSG00000280160 (RP11-196G11.3)
 ENST00000624508 (RP11-196G11.3-001) 31093727-31095944 TEC
CIL_0006UF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000096145-ENSMUSG00000030802 CGP 10090 7:127893067-127909664
GeneTranscriptPositionBiotype
ENSMUSG00000030802 (Bckdk)
branched chain ketoacid dehydrogenase kinase 		ENSMUST00000071056 (Bckdk-001) 127904082-127909664 protein_coding
ENSMUST00000124533 (Bckdk-004) 127905737-127907526 processed_transcript
ENSMUST00000146574 (Bckdk-002) 127904103-127905962 retained_intron
ENSMUST00000151451 (Bckdk-003) 127904640-127906171 protein_coding
ENSMUSG00000096145 (Vkorc1)
vitamin K epoxide reductase complex, subunit 1 		ENSMUST00000033074 (Vkorc1-001) 127893067-127895617 protein_coding
ENSMUST00000119922 (Vkorc1-002) 127893238-127895309 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006UF_0001ENSG00000103507ENST00000219794ENST00000287507ENST00000394950ENST00000394951ENST00000484226ENST00000561755ENST00000566568ENST00000567530ENST00000567676ENST00000567682ENSG00000167397ENST00000300851ENST00000319788ENST00000354895ENST00000394971ENST00000394975ENST00000420057ENST00000472468ENST00000498155ENSG00000280160ENST00000624508CIL_0006UF_0002ENSMUSG00000030802ENSMUST00000071056ENSMUST00000124533ENSMUST00000146574ENSMUST00000151451ENSMUSG00000096145ENSMUST00000033074ENSMUST00000119922
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006UF_0001ENSG00000103507ENST00000219794ENST00000287507ENST00000394950ENST00000484226ENST00000566568ENST00000567530ENST00000567682ENSG00000167397ENST00000300851ENST00000354895ENST00000394975ENSG00000280160ENST00000624508CIL_0006UF_0002ENSMUSG00000030802ENSMUST00000071056ENSMUST00000124533ENSMUST00000146574ENSMUST00000151451ENSMUSG00000096145ENSMUST00000033074ENSMUST00000119922
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103507 ENST00000219794 N/A N/A 2.082±0.00 1.516±0.00 N/A 0.596±0.00 1.735±0.00 N/A N/A N/A N/A 4.440±0.00 5.926±1.07 1.099±0.00
ENST00000287507 5.652±0.00 N/A N/A N/A 5.285±0.00 1.756±1.13 N/A N/A N/A N/A N/A N/A N/A 4.150±0.00
ENST00000394950 4.467±0.00 11.150±0.00 N/A 4.660±1.42 4.259±0.00 1.679±0.96 12.320±11.49 12.910±1.42 5.755±3.69 4.349±0.00 8.629±0.44 10.126±6.07 7.754±2.18 4.117±0.21
ENST00000394951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484226 N/A N/A 1.415±0.00 N/A N/A 3.299±0.00 N/A N/A 3.509±0.00 N/A N/A 7.489±0.00 9.305±0.00 3.421±0.00
ENST00000561755 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566568 N/A N/A N/A N/A 0.636±0.00 N/A N/A N/A N/A 0.369±0.00 N/A N/A N/A 0.641±0.00
ENST00000567530 7.847±0.00 7.823±0.00 1.300±0.00 5.038±0.00 4.306±1.86 6.002±0.00 7.098±6.46 N/A 5.950±0.00 7.131±0.00 7.787±5.43 6.281±3.00 7.432±1.83 6.113±0.00
ENST00000567676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567682 22.174±0.00 25.180±0.00 N/A 8.247±0.00 25.546±0.00 13.920±0.00 N/A N/A N/A N/A 11.710±0.00 N/A N/A 19.626±0.00
ENSG00000167397 ENST00000300851 19.677±0.00 37.586±0.00 5.456±0.00 3.826±0.00 22.826±15.83 30.409±0.00 6.505±4.99 22.532±0.15 57.320±0.00 25.768±20.01 3.161±1.69 5.259±0.00 N/A N/A
ENST00000319788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000354895 N/A N/A N/A N/A N/A 7.510±0.00 N/A 8.170±0.00 N/A N/A 3.522±0.00 N/A N/A N/A
ENST00000394971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000394975 29.758±0.00 28.288±0.00 N/A 26.621±0.00 37.216±0.00 39.002±0.00 9.384±0.00 57.686±0.00 71.085±60.99 29.886±0.00 6.667±0.00 56.843±29.65 57.323±22.14 58.369±0.00
ENST00000420057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498155 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000280160 ENST00000624508 N/A N/A N/A N/A N/A 6.576±0.00 N/A N/A N/A N/A N/A N/A 6.727±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030802 ENSMUST00000071056 22.149±12.61 36.183±6.55 5.784±0.50 5.923±4.84 21.817±5.05 15.006±7.36 10.864±1.48 14.679±1.99 4.859±3.59 10.505±1.13 14.080±10.81 15.981±8.45 11.371±6.81 1.044±0.50
ENSMUST00000124533 N/A N/A N/A 15.010±0.00 30.334±0.00 N/A N/A N/A 15.105±0.00 N/A 39.747±5.27 24.911±6.84 24.364±5.93 2.474±0.00
ENSMUST00000146574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.800±0.00 N/A
ENSMUST00000151451 37.733±0.43 40.987±7.08 N/A 14.605±0.00 32.527±5.01 21.499±0.00 N/A N/A 15.019±3.52 N/A 33.834±0.10 24.441±15.51 14.038±8.52 0.921±0.00
ENSMUSG00000096145 ENSMUST00000033074 127.107±6.00 119.654±26.66 106.517±8.60 35.618±3.43 135.804±25.97 86.896±7.86 26.342±3.07 127.999±16.93 252.782±114.31 99.450±17.15 11.099±1.33 143.684±62.74 81.328±54.61 N/A
ENSMUST00000119922 N/A N/A N/A N/A 106.325±0.00 N/A N/A 99.418±24.16 204.744±17.97 N/A N/A N/A N/A N/A

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