C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coronin, actin binding protein, 2B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000103647 CORO2B 9606 + 15:68578969-68727806 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261861 CORO2B-001 68578969-68727806 protein_coding
  ENST00000540068 CORO2B-201 68616540-68727803 protein_coding
  ENST00000543950 CORO2B-202 68631988-68727803 protein_coding
  ENST00000566799 CORO2B-203 68578969-68727803 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261861ENST00000540068ENST00000566799
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261861 N/A 2.826±0.00 N/A 6.308±0.00 N/A N/A 0.192±0.00 N/A 0.333±0.00 N/A 0.070±0.00 3.925±3.84 0.823±0.33 0.643±0.40
ENST00000540068 0.747±0.00 2.013±0.00 0.542±0.00 13.678±7.66 0.570±0.00 2.027±1.50 1.031±0.00 2.757±2.66 0.322±0.00 2.036±1.13 N/A 6.613±4.89 3.007±0.13 1.247±0.98
ENST00000566799 2.484±0.00 N/A N/A 16.951±0.00 3.137±0.00 N/A 1.091±0.85 N/A 0.418±0.00 N/A 0.508±0.00 5.060±4.98 0.883±0.34 0.248±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00046P CIL_00046P_0002 CGP 15:68296533-68727806
CIL_00080E CIL_00080E_0001 VISTA 15:68398610-69001346
CIL_0008FN CIL_0008FN_0001 VISTA 15:68430786-69031787
CIL_0004GY CIL_0004GY_0002 CGP 15:68578969-68820897

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 NAS actin binding
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0015629 IBA actin cytoskeleton
GO:0016020 NAS membrane
GO:0030036 IBA actin cytoskeleton organization
GO:0051015 IBA actin filament binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079440 coro2ba coronin, actin binding protein, 2Ba protein_coding Danio_rerio
ENSMUSG00000041729 Coro2b coronin, actin binding protein, 2B protein_coding Mus_musculus

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