C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008FN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm210 VISTA 9606 15:68430786-69031787
GeneTranscriptPositionBiotype
ENSG00000103647 (CORO2B)
coronin, actin binding protein, 2B 		ENST00000261861 (CORO2B-001) 68578969-68727806 protein_coding
ENST00000540068 (CORO2B-201) 68616540-68727803 protein_coding
ENST00000543950 (CORO2B-202) 68631988-68727803 protein_coding
ENST00000566799 (CORO2B-203) 68578969-68727803 protein_coding
ENSG00000137809 (ITGA11)
integrin, alpha 11 		ENST00000315757 (ITGA11-201) 68301712-68432153 protein_coding
ENST00000423218 (ITGA11-001) 68296533-68432162 protein_coding
ENST00000562826 (ITGA11-009) 68351256-68365522 processed_transcript
ENST00000565868 (ITGA11-008) 68357079-68361641 retained_intron
ENST00000566429 (ITGA11-006) 68331951-68340843 processed_transcript
ENST00000568677 (ITGA11-007) 68357145-68361957 retained_intron
ENST00000569346 (ITGA11-005) 68331078-68336100 retained_intron
ENSG00000140350 (ANP32A)
acidic (leucine-rich) nuclear phosphoprotein 32 family, member A 		ENST00000267918 (ANP32A-006) 68779743-68817599 processed_transcript
ENST00000409628 (ANP32A-003) 68778907-68820868 nonsense_mediated_decay
ENST00000465139 (ANP32A-001) 68778535-68820895 protein_coding
ENST00000480858 (ANP32A-009) 68782772-68784466 retained_intron
ENST00000483221 (ANP32A-007) 68812946-68817715 processed_transcript
ENST00000483551 (ANP32A-002) 68780072-68792248 processed_transcript
ENST00000486054 (ANP32A-004) 68779324-68781605 retained_intron
ENST00000495420 (ANP32A-008) 68787179-68820897 retained_intron
ENST00000495764 (ANP32A-005) 68787413-68817615 processed_transcript
ENST00000560303 (ANP32A-010) 68780420-68820886 protein_coding
ENST00000561430 (ANP32A-012) 68784271-68787829 retained_intron
ENSG00000255346 (NOX5)
NADPH oxidase, EF-hand calcium binding domain 5 		ENST00000260364 (NOX5-010) 68930525-69062743 protein_coding
ENST00000388866 (NOX5-003) 69014695-69057161 protein_coding
ENST00000448182 (NOX5-011) 68930525-69056733 protein_coding
ENST00000455873 (NOX5-012) 68930634-69056725 protein_coding
ENST00000525143 (NOX5-006) 69031793-69056696 nonsense_mediated_decay
ENST00000525163 (NOX5-007) 69045958-69049058 processed_transcript
ENST00000527315 (NOX5-005) 69014732-69057122 retained_intron
ENST00000529367 (NOX5-008) 69047089-69055500 retained_intron
ENST00000530406 (NOX5-004) 69014698-69056733 protein_coding
ENSG00000258484 (SPESP1)
sperm equatorial segment protein 1 		ENST00000310673 (SPESP1-001) 68930500-68946811 protein_coding
ENST00000560188 (SPESP1-003) 68818221-68946122 processed_transcript
ENST00000561467 (SPESP1-002) 68939794-68946003 processed_transcript
ENSG00000259286 (RP11-696L21.2)
 ENST00000560974 (RP11-696L21.2-001) 68833830-68834749 processed_pseudogene
ENSG00000273851 (RP11-809H16.3)
 ENST00000611559 (RP11-809H16.3-001) 69022230-69024176 transcribed_processed_pseudogene
CIL_0008FN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm210 VISTA 10090 9:62114649-62715677
GeneTranscriptPositionBiotype
ENSMUSG00000032243 (Itga11)
integrin alpha 11 		ENSMUST00000034774 (Itga11-001) 62677826-62783982 protein_coding
ENSMUST00000159012 (Itga11-002) 62677860-62777111 retained_intron
ENSMUSG00000032249 (Anp32a)
acidic (leucine-rich) nuclear phosphoprotein 32 family, member A 		ENSMUST00000085519 (Anp32a-001) 62341329-62378812 protein_coding
ENSMUST00000126451 (Anp32a-007) 62344799-62374715 processed_transcript
ENSMUST00000128636 (Anp32a-002) 62341902-62374718 protein_coding
ENSMUST00000129026 (Anp32a-008) 62366944-62377307 processed_transcript
ENSMUST00000135395 (Anp32a-004) 62342075-62377672 protein_coding
ENSMUST00000136603 (Anp32a-006) 62366938-62373676 processed_transcript
ENSMUST00000138226 (Anp32a-003) 62341293-62377701 processed_transcript
ENSMUST00000141277 (Anp32a-009) 62344063-62373596 processed_transcript
ENSMUST00000145679 (Anp32a-010) 62373439-62377781 retained_intron
ENSMUST00000156461 (Anp32a-005) 62342464-62373583 protein_coding
ENSMUSG00000032252 (Glce)
glucuronyl C5-epimerase 		ENSMUST00000034785 (Glce-201) 62057248-62070606 protein_coding
ENSMUST00000185510 (Glce-002) 62080320-62122609 processed_transcript
ENSMUST00000185675 (Glce-001) 62057248-62122610 protein_coding
ENSMUST00000185873 (Glce-004) 62070468-62122655 protein_coding
ENSMUST00000186514 (Glce-003) 62060011-62070840 retained_intron
ENSMUSG00000041729 (Coro2b)
coronin, actin binding protein, 2B 		ENSMUST00000048043 (Coro2b-001) 62419492-62537044 protein_coding
ENSMUST00000123379 (Coro2b-002) 62453283-62536960 retained_intron
ENSMUST00000131981 (Coro2b-004) 62425583-62428001 protein_coding
ENSMUST00000151604 (Coro2b-003) 62428263-62429250 retained_intron
ENSMUST00000164246 (Coro2b-008) 62427936-62510498 protein_coding
ENSMUST00000173171 (Coro2b-007) 62432494-62520436 protein_coding
ENSMUST00000174439 (Coro2b-006) 62429334-62449148 protein_coding
ENSMUSG00000046846 (Spesp1)
sperm equatorial segment protein 1 		ENSMUST00000056949 (Spesp1-201) 62270729-62282179 protein_coding
ENSMUSG00000088986 (Gm25603)
predicted gene, 25603 		ENSMUST00000158361 (Gm25603-201) 62242763-62242867 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008FN_0001ENSG00000103647ENST00000261861ENST00000540068ENST00000543950ENST00000566799ENSG00000137809ENST00000315757ENST00000423218ENST00000562826ENST00000565868ENST00000566429ENST00000568677ENST00000569346ENSG00000140350ENST00000267918ENST00000409628ENST00000465139ENST00000480858ENST00000483221ENST00000483551ENST00000486054ENST00000495420ENST00000495764ENST00000560303ENST00000561430ENSG00000255346ENST00000260364ENST00000388866ENST00000448182ENST00000455873ENST00000525143ENST00000525163ENST00000527315ENST00000529367ENST00000530406ENSG00000258484ENST00000310673ENST00000560188ENST00000561467ENSG00000259286ENST00000560974ENSG00000273851ENST00000611559CIL_0008FN_0002ENSMUSG00000032243ENSMUST00000034774ENSMUST00000159012ENSMUSG00000032249ENSMUST00000085519ENSMUST00000126451ENSMUST00000128636ENSMUST00000129026ENSMUST00000135395ENSMUST00000136603ENSMUST00000138226ENSMUST00000141277ENSMUST00000145679ENSMUST00000156461ENSMUSG00000032252ENSMUST00000034785ENSMUST00000185510ENSMUST00000185675ENSMUST00000185873ENSMUST00000186514ENSMUSG00000041729ENSMUST00000048043ENSMUST00000123379ENSMUST00000131981ENSMUST00000151604ENSMUST00000164246ENSMUST00000173171ENSMUST00000174439ENSMUSG00000046846ENSMUST00000056949ENSMUSG00000088986ENSMUST00000158361
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008FN_0001ENSG00000103647ENST00000261861ENST00000540068ENST00000566799ENSG00000137809ENST00000315757ENST00000423218ENST00000562826ENST00000565868ENST00000569346ENSG00000140350ENST00000267918ENST00000409628ENST00000465139ENST00000483551ENST00000560303ENST00000561430ENSG00000255346ENST00000260364ENST00000527315ENST00000529367ENSG00000258484ENST00000310673ENST00000560188ENSG00000259286ENST00000560974ENSG00000273851ENST00000611559CIL_0008FN_0002ENSMUSG00000032243ENSMUST00000034774ENSMUST00000159012ENSMUSG00000032249ENSMUST00000085519ENSMUST00000126451ENSMUST00000129026ENSMUST00000135395ENSMUST00000138226ENSMUST00000145679ENSMUST00000156461ENSMUSG00000032252ENSMUST00000034785ENSMUST00000185675ENSMUST00000185873ENSMUST00000186514ENSMUSG00000041729ENSMUST00000048043ENSMUST00000131981ENSMUST00000164246ENSMUST00000174439ENSMUSG00000046846ENSMUST00000056949ENSMUSG00000088986ENSMUST00000158361
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103647 ENST00000261861 N/A 2.826±0.00 N/A 6.308±0.00 N/A N/A 0.192±0.00 N/A 0.333±0.00 N/A 0.070±0.00 3.925±3.84 0.823±0.33 0.643±0.40
ENST00000540068 0.747±0.00 2.013±0.00 0.542±0.00 13.678±7.66 0.570±0.00 2.027±1.50 1.031±0.00 2.757±2.66 0.322±0.00 2.036±1.13 N/A 6.613±4.89 3.007±0.13 1.247±0.98
ENST00000543950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566799 2.484±0.00 N/A N/A 16.951±0.00 3.137±0.00 N/A 1.091±0.85 N/A 0.418±0.00 N/A 0.508±0.00 5.060±4.98 0.883±0.34 0.248±0.00
ENSG00000137809 ENST00000315757 1.871±0.00 2.116±0.00 0.232±0.00 0.294±0.23 3.363±1.48 1.168±0.31 2.198±2.08 3.965±0.00 1.455±1.30 0.594±0.30 0.500±0.03 8.163±5.11 2.136±0.34 2.716±2.10
ENST00000423218 N/A N/A N/A 0.029±0.00 0.318±0.00 N/A N/A N/A N/A 0.024±0.00 0.020±0.00 0.739±0.52 0.097±0.00 N/A
ENST00000562826 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.688±0.00 N/A N/A N/A N/A
ENST00000565868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.738±0.00 N/A N/A N/A
ENST00000566429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569346 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.688±0.00 N/A N/A N/A N/A
ENSG00000140350 ENST00000267918 13.774±0.00 N/A 1.249±0.00 17.098±0.00 12.760±0.00 26.392±0.00 N/A N/A N/A N/A N/A N/A N/A 12.699±0.00
ENST00000409628 17.234±0.00 15.339±0.00 1.390±0.00 15.293±10.74 6.519±5.32 14.100±11.52 8.287±6.59 13.702±12.04 7.702±3.24 15.414±14.29 7.755±6.80 17.436±9.24 26.150±8.26 9.108±2.38
ENST00000465139 6.300±0.00 13.021±0.00 1.203±0.00 7.059±3.61 5.206±2.18 5.150±0.00 2.693±0.44 5.924±3.79 2.859±0.80 3.919±1.91 0.689±0.00 9.204±4.73 13.873±0.20 5.240±0.00
ENST00000480858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483551 N/A N/A 0.855±0.00 N/A 0.888±0.00 0.604±0.00 N/A N/A N/A N/A N/A 0.677±0.00 N/A N/A
ENST00000486054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495420 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495764 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560303 29.343±0.00 19.756±0.00 N/A N/A 17.757±0.00 5.853±0.00 19.948±0.00 N/A 8.455±3.09 N/A 21.521±0.00 50.609±4.71 33.692±6.06 8.079±0.00
ENST00000561430 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 80.259±0.00 54.464±0.00 18.976±0.00
ENSG00000255346 ENST00000260364 N/A 0.025±0.00 0.006±0.00 N/A 0.025±0.00 N/A N/A N/A N/A N/A N/A 0.058±0.03 N/A N/A
ENST00000388866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525163 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527315 0.050±0.00 0.078±0.00 N/A 0.088±0.00 0.092±0.00 0.065±0.00 N/A 0.054±0.00 0.042±0.00 0.108±0.04 N/A 0.132±0.11 N/A N/A
ENST00000529367 N/A N/A N/A N/A N/A N/A N/A N/A 0.083±0.00 N/A N/A N/A N/A N/A
ENST00000530406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258484 ENST00000310673 N/A 0.390±0.00 0.184±0.00 N/A 0.230±0.00 0.621±0.33 0.549±0.17 N/A 0.176±0.04 0.577±0.11 0.022±0.00 0.469±0.26 6.422±2.51 28.846±1.85
ENST00000560188 N/A N/A N/A N/A 0.370±0.00 N/A 0.802±0.00 0.243±0.17 N/A N/A N/A N/A 3.965±0.00 22.605±0.00
ENST00000561467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000259286 ENST00000560974 0.066±0.00 0.087±0.00 N/A 0.167±0.00 N/A N/A 0.043±0.00 0.018±0.00 0.131±0.00 N/A N/A 0.085±0.03 0.053±0.00 0.138±0.00
ENSG00000273851 ENST00000611559 N/A N/A N/A 0.061±0.06 N/A N/A N/A N/A N/A N/A N/A 0.009±0.00 0.014±0.00 0.206±0.12
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032243 ENSMUST00000034774 3.238±0.14 0.731±0.12 7.065±0.21 0.886±0.63 3.459±1.06 2.234±0.39 0.836±0.23 0.149±0.03 0.051±0.03 0.073±0.00 0.592±0.07 1.981±0.91 0.303±0.22 0.702±0.25
ENSMUST00000159012 N/A 0.175±0.00 N/A N/A N/A 0.569±0.00 0.192±0.07 0.114±0.00 0.024±0.01 0.210±0.10 N/A 0.773±0.00 0.048±0.01 N/A
ENSMUSG00000032249 ENSMUST00000085519 16.392±6.01 16.177±0.00 20.200±0.58 37.049±10.49 12.579±4.18 7.811±2.13 16.386±2.09 18.781±7.09 23.725±10.74 37.189±3.92 8.164±0.78 17.134±8.84 9.327±3.98 2.230±0.95
ENSMUST00000126451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.999±0.66 N/A N/A N/A
ENSMUST00000128636 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129026 N/A N/A N/A 91.963±0.00 N/A N/A N/A N/A N/A N/A 4.987±0.00 50.693±9.10 15.764±8.75 N/A
ENSMUST00000135395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.217±10.51 6.349±0.00 N/A
ENSMUST00000136603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138226 N/A N/A 25.419±1.59 51.827±17.52 N/A N/A 9.480±0.00 N/A 70.611±15.92 N/A 5.923±2.48 43.473±27.40 33.177±7.26 7.696±0.00
ENSMUST00000141277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145679 N/A N/A 48.362±7.01 88.588±1.87 18.752±0.00 N/A 18.864±6.08 29.552±0.76 65.203±32.61 N/A 12.060±3.72 65.333±48.01 42.109±23.64 16.908±0.00
ENSMUST00000156461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.073±0.00 N/A
ENSMUSG00000032252 ENSMUST00000034785 2.277±0.61 1.776±0.59 2.178±0.02 1.935±1.13 2.350±1.09 2.622±0.42 0.840±0.24 1.106±0.36 0.858±0.47 1.330±0.05 0.755±0.23 3.507±1.80 2.673±1.16 0.781±0.34
ENSMUST00000185510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000185675 2.642±1.41 1.600±0.76 2.633±0.05 2.060±0.81 1.468±0.65 0.552±0.09 1.053±0.39 0.711±0.25 1.482±0.45 2.695±0.71 0.690±0.20 1.727±0.99 1.755±0.69 0.689±0.39
ENSMUST00000185873 N/A 2.136±0.15 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186514 N/A N/A N/A N/A N/A N/A N/A N/A 1.692±0.14 N/A N/A N/A N/A 0.509±0.00
ENSMUSG00000041729 ENSMUST00000048043 4.957±1.23 3.608±0.85 1.380±0.46 12.380±4.51 4.775±1.83 0.880±0.40 1.902±0.73 1.363±0.34 0.496±0.24 11.532±1.60 0.412±0.05 1.261±0.63 1.243±0.94 0.299±0.15
ENSMUST00000123379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.767±0.00 3.159±0.42 0.410±0.00
ENSMUST00000151604 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164246 N/A N/A N/A N/A N/A 1.052±0.00 N/A N/A N/A N/A N/A 1.561±0.00 N/A 0.554±0.04
ENSMUST00000173171 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174439 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.246±0.24 N/A N/A
ENSMUSG00000046846 ENSMUST00000056949 0.012±0.00 N/A N/A 0.009±0.00 N/A 0.078±0.02 0.029±0.01 0.034±0.02 0.036±0.00 0.017±0.00 N/A 0.060±0.04 0.006±0.00 62.482±21.84
ENSMUSG00000088986 ENSMUST00000158361 N/A N/A N/A N/A N/A N/A N/A N/A 43.356±0.00 N/A N/A N/A N/A N/A

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