C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: adaptor-related protein complex 3, beta 2 subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000103723 AP3B2 9606 - 15:82659281-82709914 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261722 AP3B2-001 82659281-82709914 protein_coding
  ENST00000535348 AP3B2-003 82659532-82709779 protein_coding
  ENST00000535359 AP3B2-002 82659537-82709779 protein_coding
  ENST00000535385 AP3B2-010 82681510-82709883 retained_intron
  ENST00000535513 AP3B2-005 82688428-82709873 retained_intron
  ENST00000537735 AP3B2-009 82659285-82662696 retained_intron
  ENST00000538592 AP3B2-012 82662870-82663584 nonsense_mediated_decay
  ENST00000541693 AP3B2-011 82680897-82699240 protein_coding
  ENST00000542200 AP3B2-004 82685091-82709859 protein_coding
  ENST00000543938 AP3B2-008 82659282-82680407 retained_intron
  ENST00000545315 AP3B2-013 82662469-82663249 retained_intron
  ENST00000559888 AP3B2-015 82680732-82681601 retained_intron
  ENST00000560529 AP3B2-014 82689400-82709865 processed_transcript
  ENST00000561455 AP3B2-016 82686815-82708851 processed_transcript
  ENST00000620652 AP3B2-201 82659282-82709908 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261722ENST00000535348ENST00000535359ENST00000535385ENST00000537735ENST00000541693ENST00000542200ENST00000543938ENST00000559888ENST00000560529ENST00000561455ENST00000620652
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261722 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.014±0.00 N/A N/A 0.065±0.01 N/A
ENST00000535348 0.192±0.00 N/A N/A N/A N/A 0.104±0.00 0.061±0.00 N/A N/A N/A N/A N/A 0.112±0.00 N/A
ENST00000535359 N/A N/A 0.140±0.00 N/A N/A N/A N/A 0.261±0.00 N/A N/A 0.180±0.00 N/A N/A N/A
ENST00000535385 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.200±0.00 N/A N/A 0.210±0.00 N/A
ENST00000537735 N/A N/A N/A N/A N/A N/A N/A N/A 0.026±0.00 N/A N/A 1.058±0.00 N/A N/A
ENST00000541693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.279±0.00 0.119±0.00 N/A
ENST00000542200 N/A 0.071±0.00 N/A N/A 0.101±0.00 N/A 0.012±0.00 0.127±0.00 0.005±0.00 N/A N/A 0.144±0.00 0.042±0.02 N/A
ENST00000543938 0.123±0.00 N/A 0.062±0.00 7.054±4.82 0.195±0.15 0.130±0.00 N/A 0.159±0.00 N/A 0.063±0.00 0.022±0.00 0.642±0.64 0.134±0.07 7.335±0.12
ENST00000559888 N/A N/A N/A N/A N/A N/A N/A N/A 0.209±0.00 N/A N/A N/A N/A N/A
ENST00000560529 N/A N/A N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A N/A N/A N/A N/A
ENST00000561455 0.474±0.00 1.354±0.00 N/A N/A 0.989±0.00 0.423±0.00 0.245±0.18 1.453±0.00 0.035±0.00 0.126±0.00 0.798±0.00 N/A N/A N/A
ENST00000620652 N/A N/A N/A 6.303±0.57 0.171±0.00 0.294±0.00 N/A 0.176±0.00 N/A 0.018±0.00 N/A N/A 0.082±0.02 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006GR CIL_0006GR_0001 CGP 15:82543201-82709914

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 TAS transporter activity
GO:0005488 IEA binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0006886 IEA intracellular protein transport
GO:0006892 TAS post-Golgi vesicle-mediated transport
GO:0008089 ISS anterograde axon cargo transport
GO:0016192 IEA vesicle-mediated transport
GO:0030117 IEA membrane coat
GO:0030123 IEA AP-3 adaptor complex
GO:0030137 TAS COPI-coated vesicle
GO:0048490 ISS anterograde synaptic vesicle transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063432 AP3B2 adaptor-related protein complex 3, beta 2 subunit protein_coding Danio_rerio
ENSMUSG00000062444 Ap3b2 adaptor-related protein complex 3, beta 2 subunit protein_coding Mus_musculus

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