C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor-related protein complex 3, beta 2 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000535348 AP3B2-003 ENSG00000103723 9606 - 15:82659532-82709779 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonHeartPlacentaENST00000535348
Transcript ID Adipose Colon Heart Placenta
ENST00000535348 0.192±0.00 0.104±0.00 0.061±0.00 0.112±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006GR CIL_0006GR_0001 CGP 15:82543201-82709914

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 TAS transporter activity
GO:0005488 IEA binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0006886 IEA intracellular protein transport
GO:0006892 TAS post-Golgi vesicle-mediated transport
GO:0008089 ISS anterograde axon cargo transport
GO:0016192 IEA vesicle-mediated transport
GO:0030117 IEA membrane coat
GO:0030123 IEA AP-3 adaptor complex
GO:0030137 TAS COPI-coated vesicle
GO:0048490 ISS anterograde synaptic vesicle transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000082090 Ap3b2-001 protein_coding Mus_musculus 0 3568
ENSMUST00000147624 Ap3b2-004 retained_intron Mus_musculus 0 1349
ENSMUST00000152355 Ap3b2-002 retained_intron Mus_musculus 0 1035
ENSMUST00000125634 Ap3b2-005 processed_transcript Mus_musculus 0 597
ENSMUST00000119121 Ap3b2-003 protein_coding Mus_musculus 0 361
ENSDART00000092663 AP3B2-201 protein_coding Danio_rerio 4e-31 141

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